ggKbase home page

2019_SCN_bioreactor_t2_biofilm_scaffold_68963_17

Organism: 2019_SCN_bioreactor_t2_biofilm_Alphaproteobacteria_70_37

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(11560..11958)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S8 n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=RS8_GRABC similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 132.0
  • Bit_score: 240
  • Evalue 9.60e-61
SSU ribosomal protein S8P similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 132.0
  • Bit_score: 240
  • Evalue 2.70e-61
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 132.0
  • Bit_score: 240
  • Evalue 1.30e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Granulibacter bethesdensis → Granulibacter → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGTCACTATCCGATCCTGTGGGCGATATGCTCACACGCATCCGCAATGCGCAGCGTTCGCGCCATGCGGTGTGCGTCTCGCCGGCTTCCAAGCTGCGCGCCAACCTGCTGGATGCACTGAAGCGCGAGGGTTTCATCCGCGGCTTCTCCGCCGAGGAACTGCGCCCCGGCGTGTCGCAGCTGCGCATCGAGCTGAAGTACAACGAGGGTGAACCGGTGATCAAGGAGATCACCCGCGTGTCCAAACCGGGCCGCCGCGTCTATTCCAAGATCAAGGAATTGCCGCGCGTCTATGCCGGGCTGGGCATCTCCATCCTGTCGACCCCCCGTGGGGTGTTGAGCGACGCCGAGGCCCGCGCTGCCAATGTTGGCGGCGAAGTCCTCTGCCGCGTGTTCTGA
PROTEIN sequence
Length: 133
MSLSDPVGDMLTRIRNAQRSRHAVCVSPASKLRANLLDALKREGFIRGFSAEELRPGVSQLRIELKYNEGEPVIKEITRVSKPGRRVYSKIKELPRVYAGLGISILSTPRGVLSDAEARAANVGGEVLCRVF*