ggKbase home page

2019_SCN_bioreactor_t2_biofilm_scaffold_68963_19

Organism: 2019_SCN_bioreactor_t2_biofilm_Alphaproteobacteria_70_37

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(12361..13059)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 n=3 Tax=Acidiphilium RepID=A5FZV3_ACICJ similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 181.0
  • Bit_score: 298
  • Evalue 4.00e-78
rplE; 50S ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 181.0
  • Bit_score: 298
  • Evalue 1.10e-78
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 181.0
  • Bit_score: 298
  • Evalue 5.60e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidiphilium sp. JA12-A1 → Acidiphilium → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGAGCGGCACGAAGAAGGCGCCGGCCAAGGCCGGCGGCAAGGCGGGCGGCAAGTCCGCAGGTGGCACGGGCGGTCCCGGCGCTGCTGTTATCCCGTCGCGCGGGCGCGGCGAGGTCAGCTACAAGCCGACCGCCGAGCCGAAGGCGGGCGCGGGCGCGGCGCCGCGCATGCAGCAGCGCTACATGGAGACGATCCGCAAGGCGCTGCAGGAGGAGTTCGGCTACACGAACCCCATGCAGGTGCCGAAGCTGGAGAAGATTGTCATCAACATGGGCGTCGGCGAAGCCTCCGGCGACCAGAAGAAGCTGGATGCGGCGCTGAGTGAACTGGCCCTGATCAGCGGCCAGCGGCCGGTGAAGACGGTGGCCAAGAAGGCGATCGCCGGCTTCAAGATCCGCAAGGGTCTGCCGATCGGCTGCAAGGTGACGCTGCGCAAGACCCGGATGTACGAGTTCCTCGATCGTCTGGTGACCATCGCGCTGCCGCGCGTGCGCGACTTCCGCGGCATTGGCGGCAAGGGCTTCGACGGGCGTGGCAACTTCGCCATGGGCATGAAGGAGCAGATCGTGTTCCCCGAGATCGTCTACGACAAGGTCGAGACGATCCGCGGCATGGACATCGTCTTCGTCACCAGCGCCCGTAGCGACGCCGAGGCGAAGGCCCTGCTGAAGCAGTTCGATATCCCGTTCGCCGCTTGA
PROTEIN sequence
Length: 233
MSGTKKAPAKAGGKAGGKSAGGTGGPGAAVIPSRGRGEVSYKPTAEPKAGAGAAPRMQQRYMETIRKALQEEFGYTNPMQVPKLEKIVINMGVGEASGDQKKLDAALSELALISGQRPVKTVAKKAIAGFKIRKGLPIGCKVTLRKTRMYEFLDRLVTIALPRVRDFRGIGGKGFDGRGNFAMGMKEQIVFPEIVYDKVETIRGMDIVFVTSARSDAEAKALLKQFDIPFAA*