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2019_SCN_bioreactor_t2_biofilm_scaffold_81283_9

Organism: 2019_SCN_bioreactor_t2_biofilm_Alphaproteobacteria_70_37

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 9174..9860

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Rhodospirillum rubrum RepID=G2TB06_RHORU similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 208.0
  • Bit_score: 197
  • Evalue 9.50e-48
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 208.0
  • Bit_score: 197
  • Evalue 2.70e-48
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 208.0
  • Bit_score: 197
  • Evalue 1.30e-47

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Taxonomy

Rhodospirillum rubrum → Rhodospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGGATGTCCTGTTGCCCCACCCCGCGCTTGCCTCGCTGGATATGGCGAGGCCGCACACCGCCGCGCCAGGAACCGCGCGCTGGGCGGCGCGGCTATACTGCATGACCGGGCCGCGTATGAGCACGCCATCCGCGCTCACCGGCGAGGCGGCGGGCGCACTCATCCAGCGCATCGCCACGGCGCGCGACCGCGCCGCCTTTGCCGCCCTGTTCATCCATTTCGCGCCGCGCGTGAAGGCCTATCTGCGCCGGCTGGGCGCCGTCGACCCGCAGGCCGAAGACCTCGCCCAGGAGGTGCTGCTGGCGGTGTGGCACAAGGCCGACCGCTTCGACCCGCAGCGCGCCGCCGCCTCCACCTGGGTGTTCACCATCGCGCGCAACATGCGCATCGACGCGCTGCGGCGCGAACCGCGCGGCGGCATCGTGCCCGCGGACGACCTGCCGGACATGGAAGATGACACACCGGCCGCCGATGCCATGCTGATCGTGGGCGAGCGCGACCGCGCCCTGCGCGACGCCATGGCCGCGCTGCCGGCCGAACAGGCCAGGCTCGTGCGGCTCGCCTTCCTGGAGGACAAGCCCCATTCGGAGATCGAGCGGCAGCTCGGCATCCCGCTGGGCACCGTGAAATCACGGCTGCGCCTGGCGATGCAACGCCTGCGCGCGGCGATGGAGGGCCGGCGGTGA
PROTEIN sequence
Length: 229
MDVLLPHPALASLDMARPHTAAPGTARWAARLYCMTGPRMSTPSALTGEAAGALIQRIATARDRAAFAALFIHFAPRVKAYLRRLGAVDPQAEDLAQEVLLAVWHKADRFDPQRAAASTWVFTIARNMRIDALRREPRGGIVPADDLPDMEDDTPAADAMLIVGERDRALRDAMAALPAEQARLVRLAFLEDKPHSEIERQLGIPLGTVKSRLRLAMQRLRAAMEGRR*