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2019_SCN_bioreactor_t2_biofilm_scaffold_81283_24

Organism: 2019_SCN_bioreactor_t2_biofilm_Alphaproteobacteria_70_37

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 23635..24732

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance protein mdtA n=1 Tax=Azospirillum amazonense Y2 RepID=G1XYS5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 337.0
  • Bit_score: 334
  • Evalue 1.40e-88
Multidrug resistance protein mdtA {ECO:0000313|EMBL:EGY01575.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 337.0
  • Bit_score: 334
  • Evalue 1.90e-88
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 354.0
  • Bit_score: 316
  • Evalue 8.30e-84

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Taxonomy

Nitrospirillum amazonense → Nitrospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1098
GTGGCCCCCCTGCTGGCTGCATTCGCGCTGCTGCTCGCCGCCCCGGCCCGGGCGCAGGACGCGGGCGGCGCGCCCGCCGTGCCGGTGACCGTCGCCACCGCGGCTCTGCGCGACCTGCCGGTGGAGTTGCGCAATATCGGCGCGGTGCAGGCCAACCAGACGGTGCTGATCCGCACCCGGGTGGACGGCACGCTGGACCAGGTGTTCTTCACCGAGGGGCAGGAGGTGAAGCGCGGCGACAAGATCGCCCAGATCGATCCGCGCCCCTACCAGGCGACGCTGGACCAGGCGCAGGCCAAGCGGGCGGCCGACCTGGCGCAGCTTGCCAATGCGCGGCTGGACCTCGGCCGGTCCACGCAGCTCGCGCGCAGCCAGTTCGCCTCGCGCCAGACCGTGGACACTCAGGGGGCCACGGTGGCGCAGCTCGAAGCGCAGGTGAAATCCGACGACGCCAGCGTGGCGGCGGCACAGCTGAACCTGACCTACACCACCATCACCGCGCCGTTCGACGGGCGGCTGGGGCTGCGGCAGGTGGACCCCGGCAATGTGGTGCGCTTCGCCGACACCAGCGGCGTGGGCATCGTGACGCTCAGCCAGATCCATCCGATCGCGGTGCTGTTCAACGTGCCGCAGGACCAGGTGCCGGCGATCCAGGCGGCGATGGCCAAACGGACCCTGCCGGTGACCGCCTACCGCTCGGACGACAAGACCCGGCTGGGCGAGGGCACGCTGCTGACCATGGACAACGCCGTGGATGCCGCCAGCGGCACGATCCGGCTGAAGGCGCTGTTCCCGAACACCGACAACGCGCTGTGGCCGGGGCAGTTCGTCAATGCCAGCCTGCTGCTGGATGTGCGGCGCGGCGTGCTGACGGTGCCGTCGGTCGCCGTGCAGCACGGGCCGGGCAACCTGTTCGTGTATGTCGTGAAGCCCGATTCGACCGTGGCGGTGCAGACGGTGGCAGTGGGCCAGGACGACGGCCGCGTGGCCATGATCACCAAGGGGCTGGACGCCGGCGCGCGGGTGGTGGTGAACGGCCAGTCGCGGCTGCGCCAGGGCACGCATGTGACGGTGACCGAGGCCAAGCCCAACGCCTGA
PROTEIN sequence
Length: 366
VAPLLAAFALLLAAPARAQDAGGAPAVPVTVATAALRDLPVELRNIGAVQANQTVLIRTRVDGTLDQVFFTEGQEVKRGDKIAQIDPRPYQATLDQAQAKRAADLAQLANARLDLGRSTQLARSQFASRQTVDTQGATVAQLEAQVKSDDASVAAAQLNLTYTTITAPFDGRLGLRQVDPGNVVRFADTSGVGIVTLSQIHPIAVLFNVPQDQVPAIQAAMAKRTLPVTAYRSDDKTRLGEGTLLTMDNAVDAASGTIRLKALFPNTDNALWPGQFVNASLLLDVRRGVLTVPSVAVQHGPGNLFVYVVKPDSTVAVQTVAVGQDDGRVAMITKGLDAGARVVVNGQSRLRQGTHVTVTEAKPNA*