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2019_SCN_bioreactor_t2_biofilm_scaffold_123040_4

Organism: 2019_SCN_bioreactor_t2_biofilm_Alphaproteobacteria_70_37

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 3622..4611

Top 3 Functional Annotations

Value Algorithm Source
OmpA family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RS57_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 369.0
  • Bit_score: 329
  • Evalue 3.00e-87
OmpA family protein {ECO:0000313|EMBL:EFH09863.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 369.0
  • Bit_score: 329
  • Evalue 4.20e-87
Outer membrane protein A similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 364.0
  • Bit_score: 303
  • Evalue 3.80e-80

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Taxonomy

Roseomonas cervicalis → Roseomonas → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGACAAACCTGCGCAACGCGATGCTCGCCGCAACCCTGGTGGCCCTGCCGGTTTCGGCGATGGCCCAGCCCGTCAGCGGCATCTATGTCGGCGCCGGCGTCGGCGTGAACCAGCTCTTCAACATGAAGACGAAGCCCAACGCCTTCACCCTGAAGTCCGACCTCGGCTATGTCGGCTCGGTCAGCGCCGGCTACGGCTTCGGCAACGGCCTGCGCGGCGAACTGGAGTTCGCCTATCGCGGCGCCCACTCCAAGATCGGCGGCACCGGCGGCGACTCCGGCATCTACGGCGTGATGGCCAACGCCATCTATGACATCGACGCCGGCTTCGGCTGGATGTACCCGTATATCGGCGCCGGCATCGGCTACCAGTGGATGGCGATCTCCGGCGGTGGCGGCCACGCCCAGTCCAACGGCAACCTCGCCGCCCAGGGCATCGTCGGCGCGGCCTTCCCGACCAGCGTCGCCGGCCTCTCGGTCACCGCCGACGTCCGCTACCTGACCTCGTTCGACGACACCAACTTCCGCGGCAACGGCAAGCTGGACAGCTTCCAGAACCTGTCGGGCATGATCGGCCTGCGCTACGCCCTGGGCGCCGCCCCGGTCGCGGCTGCCCCGGCCCCGGCGGCGGTTCCCGCGGCCGCACCGGCCCCGGCCCCGGTCCGCACCTATCTGGTGTTCTTCGATTGGGACAAGTCTGACCTGACCGCCCGTGCCCGCCAGATCATCGCCGAGGCGGCGCAGGCTTCCACCCGCGTGCAGACCACCCGCATCGAGGTTGACGGCCACGCCGACAAGTCCGGCACTGCCCGCTACAACCAGGCGCTGTCCATGCGTCGCGCCCAGGTCGTCGCGGCCGAGCTGGTTCGCCTGGGCGTCGCCCAGTCGGCCATCGACATCCAGGCCTTCGGCGACACCAAGCCGCTGGTCCCCACCGCCGACGGTGTGCGCGAGCCGCAGAACCGCCGCGTGGAAATCATCCTGAAGTAA
PROTEIN sequence
Length: 330
MTNLRNAMLAATLVALPVSAMAQPVSGIYVGAGVGVNQLFNMKTKPNAFTLKSDLGYVGSVSAGYGFGNGLRGELEFAYRGAHSKIGGTGGDSGIYGVMANAIYDIDAGFGWMYPYIGAGIGYQWMAISGGGGHAQSNGNLAAQGIVGAAFPTSVAGLSVTADVRYLTSFDDTNFRGNGKLDSFQNLSGMIGLRYALGAAPVAAAPAPAAVPAAAPAPAPVRTYLVFFDWDKSDLTARARQIIAEAAQASTRVQTTRIEVDGHADKSGTARYNQALSMRRAQVVAAELVRLGVAQSAIDIQAFGDTKPLVPTADGVREPQNRRVEIILK*