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2019_SCN_bioreactor_t2_biofilm_scaffold_205439_25

Organism: 2019_SCN_bioreactor_t2_biofilm_Alphaproteobacteria_70_37

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(31743..32456)

Top 3 Functional Annotations

Value Algorithm Source
Octopine transport system permease protein OccQ n=3 Tax=Rhizobium radiobacter RepID=OCCQ_AGRT4 similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 230.0
  • Bit_score: 293
  • Evalue 1.30e-76
ABC transporter permease {ECO:0000313|EMBL:KFG67528.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 235.0
  • Bit_score: 295
  • Evalue 4.90e-77
nocQ; octopine/nopaline transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 230.0
  • Bit_score: 293
  • Evalue 3.70e-77

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Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGGCTGCCTACTTCACCCTGATCGGCTTTGGCCCTAACGGCTGGGGTTGGCAGCTCGCCCAGGCGACCTTCATGACGCTGGCGGTCTCCGCCAGTGCCTTCGCCACCGGCTTGGTCTTCGGCACGCTCGGTGCCTGGGCCAAGCTGTCCGGCTCGTCCCTCGCGGCCGCCGCGGCCAGTGTGTACACCACCGTGCTGCGCGGCATTCCCGACCTGCTGGTGGTGTATTTGTTCTACTTCGGCGGCAGCCAGGTGATGACCTCGATCGGCCACCTGCTCGGCCACGGCGGCTTCCTGGGGCTGAACGGCTTCATGGTCGGCACCCTGGCGGTGGGCATCGTCTCCGGCGCCTACCAGACCGAGGTGATCCGCGGCGGCTACGACGCGGTGCCGCGCGGCGAGATCGAGGCGGCGCGCGCCGTGGGCATGGGGCGCCTGCTGATGCTGCGGCGCATCATCGCCCCCCGCACGCTGCGCTTCGCGCTGCCCGGCATCGGCAATGTGTGGCAGCAGGTGCTGAAGGAATCCGCCCTGATCTCGGTCACCGGGCTGGTCGAGATCATGCGCCAGATCCATATCGGCGCCGGCTCCACCCGCCTGCCGTTTGACTTCTACGTCACCGGCTTCGCCCTCTACCTGATGCTGACCACGCTGACCGGACAGGTGTTCCGTCTGGCCGAAGGCCGCACCCTGCGCGGCGAGCGGCTGGCCTAG
PROTEIN sequence
Length: 238
MAAYFTLIGFGPNGWGWQLAQATFMTLAVSASAFATGLVFGTLGAWAKLSGSSLAAAAASVYTTVLRGIPDLLVVYLFYFGGSQVMTSIGHLLGHGGFLGLNGFMVGTLAVGIVSGAYQTEVIRGGYDAVPRGEIEAARAVGMGRLLMLRRIIAPRTLRFALPGIGNVWQQVLKESALISVTGLVEIMRQIHIGAGSTRLPFDFYVTGFALYLMLTTLTGQVFRLAEGRTLRGERLA*