ggKbase home page

2019_SCN_bioreactor_t2_biofilm_scaffold_205439_26

Organism: 2019_SCN_bioreactor_t2_biofilm_Alphaproteobacteria_70_37

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(32480..33298)

Top 3 Functional Annotations

Value Algorithm Source
Lysine-arginine-ornithine-binding periplasmic protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUJ0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 271.0
  • Bit_score: 292
  • Evalue 2.60e-76
Lysine-arginine-ornithine-binding periplasmic protein {ECO:0000313|EMBL:EIM27632.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 271.0
  • Bit_score: 292
  • Evalue 3.60e-76
Extracellular solute-binding protein family 3 similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 269.0
  • Bit_score: 287
  • Evalue 3.10e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGGCCCTGGCGGCCACGCTTGCGGCACCGCTGGCGCAGGCCAAGGAGTGGAAGAAGGTCGTGATCGCGACCGAGGGCGCCTACATGCCGTATAACGGCCACGCGCCCGACGGCAAGCTGATCGGCTTCGAGATCGACCTGGCCAAGGACCTGTGCGCCCGCATGAAGGTCACCTGCGAGGTGATCGCCCAGGACTGGAACGGCATCATCCCCGGCCTCACCGCCGGCAAATACGACGCCATCATGGCCGGCATGAGCATCACCGCCAAGCGCAAGGAGGTGATCGACTTCTCCCGCGCCTACGTGAACTCGCCCAGCACCTTCGCCGTGCCCAAGAGCGGGGCGCTGGCCGCCCTGCCCGACACCGGCGTGCGCATCTCGCTGGACGACAAGGCGGCGATCGACGCAGAGGTGGCCAAGCTGAAGCCGCTGCTGCAAGGCAAGGTCATCGGCGCCCAGGTCTCCACCATCCAGGCCGACATGCTGAACACCTACTTCAAGGGCGTGGCGACCATCCGCACCTACCCGACCACCGAGGAGCACGACCTCGACCTGCAGGCCGGCCGGCTGGACGCGGCGCTGGCCGCCACCTCCTACTTCGTCTCGACGCTGGCCAAGCCGGGCGGCAGCGACCTCAAGCTCGCCGGGCCGCTGTTCAGCGGCGGGCTGCTGGGCGCCGGGGTGGGCGTGGGCCTGCGCAAGAGCGATCCGGAGCTGAAGGCCATGTTCGACACCGCGATCAACGCCGCCATCGCCGACGGGACGATGAAGAAGCTGTCGCTACAATGGTTCAAGACCGACATCAGCGCGCCGAAGTAA
PROTEIN sequence
Length: 273
MALAATLAAPLAQAKEWKKVVIATEGAYMPYNGHAPDGKLIGFEIDLAKDLCARMKVTCEVIAQDWNGIIPGLTAGKYDAIMAGMSITAKRKEVIDFSRAYVNSPSTFAVPKSGALAALPDTGVRISLDDKAAIDAEVAKLKPLLQGKVIGAQVSTIQADMLNTYFKGVATIRTYPTTEEHDLDLQAGRLDAALAATSYFVSTLAKPGGSDLKLAGPLFSGGLLGAGVGVGLRKSDPELKAMFDTAINAAIADGTMKKLSLQWFKTDISAPK*