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2019_SCN_bioreactor_t2_biofilm_scaffold_231817_18

Organism: 2019_SCN_bioreactor_t2_biofilm_Alphaproteobacteria_70_37

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 17355..18773

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E05C2 similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 435.0
  • Bit_score: 364
  • Evalue 1.60e-97
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 415.0
  • Bit_score: 359
  • Evalue 1.40e-96
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AFK54778.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 415.0
  • Bit_score: 359
  • Evalue 7.10e-96

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Taxonomy

Tistrella mobilis → Tistrella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
ATGACCGACCCGGCGCGGGCGGCGGCCGAGGCGGCCGCCCGCGCCTCCTACGGCCGTCTGGTCGCCTGGCTGGCCGCGCGCACGCGCGACGTGGCCGCCGCCGAGGACGCGCTGGCCGACGCCTTCGCCGCCGCGCTGCGCACCTGGCCGGCGCGCGGCGTGCCCGACCGGCCGGAGGCATGGCTGCTGACCACGGCCCGCCGCAACCTGGGCCACGCCGCCCGCCACCGGCTGGTGCGGGCCGCCGCCGCCCCCACACTGCATTTGCTCGCCACGGCCGCGCAGGACCGCGACGAGGCGGGCGCCTTCCCGGACGAGCGGCTGAAGCTGCTGTTCGTCTGCGCCCACCCGGCGATCGACCCGGCTATGCACACGCCGCTGATGCTGCAATCGGTGCTGGGGCTGGACGCCGCCCGCATCGCCGCCGCCTTCGTCGTCGCGCCCGCCGCGATGGGCCAGCGGCTGGTGCGCGCCAAGGCGAAGATCCGCGACGCCGGCATCCGCTTCGCCGTGCCCGGGCCGGCGGACCTGCCGGCCCGGCTGGCCCCGGTGCTGGACGCGGTCTACGCCGCTTTCGGCACCGCCTGGGACGCACCGCCCAGGGGTGAGGAGCCTGGCGGGCCGGCGGCGAACCTGGGCGAGGAGGCCATCTGGCTCGCCCGCCTCATCGCCAGCCTGCTGCCGGAGGAGCCGGAGGCGCTGGGCCTGCTCGCGCTGCTGCTGCACTGCCAGGCCCGCCAGCCGGCCCGCCGCGACGCCGCCGGTTTCGTGCCGCTCTCGGCGCAGGACCCGGCGCTGTGGTCCGCCCCGCTGATCGCCGAGGCGGAGGCGGCGCTGCTGCGGGCCTGCGCCCTGGGGCGGATCGGGCGGTTCCAGCTGGAGGCGGCGATCCAGTCCGCCCATGCCGGCCGGGCGCGCGGCGCGGCGGTGGACTGGGTGGGCAGCGGTGGCCGGGCTGTACGCGGCGCTGCTGGCCGTCGCCCCCACGCTGGGCGCACGCGTCGGCCACGCCGCCGCGGTGGCCGAGGCGGAGGGCGCGCTGGCCGGCCTCGCCCTGCTGGACAGCATCGGGAGCGCCGAATCCTATCAGCCCTGGTGGGCGGTGCGGGCGCATCTGCTGGCCCGGCTGGGGCGGCACGGCGCGGCGCGGTCCGCCTACGCGCAGGCCGCCCTGCTGGCGCACGACCCGGCGGTGCGGACGTTCCTGCGGGCGCGGGCAGGGGCGGGGATGTGAGTGGAGAGGACCTGGGCTGGCGCGGTCAGAACAGCCCGCCGGCCACCAGGGCCGCGAACACGGCGGCGGCCCCGCCCAGCACGCCCGCGCCCAGCGCCAGCGCCCCCACCCGCGTGACCACCGAGACCGAGGCCAGCACGATGGCGATCTGCAGCGCGCCGACCACACCCTCGAACAGGTGGTAG
PROTEIN sequence
Length: 473
MTDPARAAAEAAARASYGRLVAWLAARTRDVAAAEDALADAFAAALRTWPARGVPDRPEAWLLTTARRNLGHAARHRLVRAAAAPTLHLLATAAQDRDEAGAFPDERLKLLFVCAHPAIDPAMHTPLMLQSVLGLDAARIAAAFVVAPAAMGQRLVRAKAKIRDAGIRFAVPGPADLPARLAPVLDAVYAAFGTAWDAPPRGEEPGGPAANLGEEAIWLARLIASLLPEEPEALGLLALLLHCQARQPARRDAAGFVPLSAQDPALWSAPLIAEAEAALLRACALGRIGRFQLEAAIQSAHAGRARGAAVDWVGSGGRAVRGAAGRRPHAGRTRRPRRRGGRGGGRAGRPRPAGQHRERRILSALVGGAGASAGPAGAARRGAVRLRAGRPAGARPGGADVPAGAGRGGDVSGEDLGWRGQNSPPATRAANTAAAPPSTPAPSASAPTRVTTETEASTMAICSAPTTPSNRW*