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2019_SCN_bioreactor_t2_biofilm_scaffold_239789_6

Organism: 2019_SCN_bioreactor_t2_biofilm_Alphaproteobacteria_70_37

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 3647..4366

Top 3 Functional Annotations

Value Algorithm Source
TonB n=1 Tax=Pseudomonas syringae pv. aceris str. M302273 RepID=F3JDA1_PSESX similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 235.0
  • Bit_score: 138
  • Evalue 7.10e-30
TonB {ECO:0000313|EMBL:EGH69824.1}; TaxID=629270 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. aceris str. M302273.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.4
  • Coverage: 235.0
  • Bit_score: 138
  • Evalue 1.00e-29
TonB C-terminal domain-containing protein, ferric siderophore transporter similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 255.0
  • Bit_score: 127
  • Evalue 4.70e-27

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Taxonomy

Pseudomonas syringae → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGATCCCCGGCATGGCCAGAGGCCGCCCACGCCGCCGCCTGCTGCCGTTCCTGCTGGCCTCGCTGGCGCTGCACGCGCTGGTGGTGGCGGCCCTGGTGGCGCGGCACGCCATCACCCTTCCCGTCTCCCCGCCCCCCGAGCCGGAACAGCCGGCGGTGGTGGAGGTGATGGTCGGCGGCGGCGGCGACCAGGGCCGGCCGGCCCCGCCCCCCGCACCCGTTCCACCCACGCCCGCACCGCCACAGCCAGCGCCGCCACAATCAGCGCCGCCACAATCAGCACCGCCACAATCAGCACCGCCCAAGCCCGCGCCACCCGCGCCGACCTCGCCCGCGCCCGCGCCCACGGCGCCGGAACCGCCCGCGCCGCCCCCCACGCCGCCAGCCGTGCGGCTGAATGCCGGGCATCGCGGGCCGGCGGCGCAGCTGGAGCAGCGGAACGGGCAGGTCCGGGCGGCCAAGGCGGATTCACGCAACCTGCCGCCGGTCTACCCCGCCGAAGCGGCGCTGCGCCGCGAGCACGGCACCACGCTGGCGCGGCTGCATATCGATGCGCTGGGCGATGTGGTAGCGGTGGAGATCGTCAAGTCCTCCGGCTCGCCGCGGCTGGACGGCGCAGTGCGCGAGGCGGTGCGCACCTGGCACTTCACGCCGGCCGAGCGCGCAGGCCAGCCGGTGCCGGACAGCGTCGAGATCAACTTCGCCTTTGAACTTAAGTAG
PROTEIN sequence
Length: 240
MIPGMARGRPRRRLLPFLLASLALHALVVAALVARHAITLPVSPPPEPEQPAVVEVMVGGGGDQGRPAPPPAPVPPTPAPPQPAPPQSAPPQSAPPQSAPPKPAPPAPTSPAPAPTAPEPPAPPPTPPAVRLNAGHRGPAAQLEQRNGQVRAAKADSRNLPPVYPAEAALRREHGTTLARLHIDALGDVVAVEIVKSSGSPRLDGAVREAVRTWHFTPAERAGQPVPDSVEINFAFELK*