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2019_SCN_bioreactor_t2_biofilm_scaffold_207161_28

Organism: 2019_SCN_bioreactor_t2_biofilm_Xanthomonadales_71_37

near complete RP 51 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: 12522..13151

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URX8_PSEUP similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 209.0
  • Bit_score: 383
  • Evalue 1.10e-103
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 209.0
  • Bit_score: 390
  • Evalue 9.80e-106
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 209.0
  • Bit_score: 383
  • Evalue 3.20e-104

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGCTCGTTATATCGGTCCCACCTGCAAGCTCGCCCGCCGCGAAGGCGCCGACCTGTCGCTGAAGTCGCCGGCGCGCGCGCTCGACTCCAAGTGCAAGCTGGAGCAGAAGCCCGGCCAGCATGGCGCCACCGCCCGCAAGGGCAAGCTGTCCGACTACGCCACCCAGCTGCGCGAGAAGCAGAAGGTCAAGCGCATCTACGGCCTGCTGGAACGCCAGTTCCGCAATTACTACAAGAAGGCCGCGACCAAGAAGGGCAACACCGGCGAGAACCTCCTGCAGCTGCTGGAGACCCGCCTGGACAACGTCGTCTACCGCATGGGCTTCGCCGTCACCCGCCCGGCCGCGCGCCAGCTGGTCAGCCATCGCGGCGTGACCGTGAACGGCAAGCCGGTCAACCTGCCGTCCTACACGGTCAAGGCCGGCGACGCGATCGCGCTGTCGGAGAAGGCGCAGAAGCAGATGCGCGTGAAGGAGTCGCTGACCCTCGCCGAGCAGATGAACCTGTCGCCGTCCTGGGTGGAAGTGGATGCCGGCAAGTTCGCCGGCGTGTTCAAGGCGGTGCCGGATCGCGCCGACCTGCCCAGCGACATCAACGAAGCGCTGATCGTCGAGCTGTACTCGAAGTAA
PROTEIN sequence
Length: 210
MARYIGPTCKLARREGADLSLKSPARALDSKCKLEQKPGQHGATARKGKLSDYATQLREKQKVKRIYGLLERQFRNYYKKAATKKGNTGENLLQLLETRLDNVVYRMGFAVTRPAARQLVSHRGVTVNGKPVNLPSYTVKAGDAIALSEKAQKQMRVKESLTLAEQMNLSPSWVEVDAGKFAGVFKAVPDRADLPSDINEALIVELYSK*