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2019_SCN_bioreactor_t3_planktonic_scaffold_18389_9

Organism: 2019_SCN_bioreactor_t3_planktonic_Azospirillum_lipoferum_68_106

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 13306..13986

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000313|EMBL:CBS88343.1}; EC=5.4.99.- {ECO:0000313|EMBL:CBS88343.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 226.0
  • Bit_score: 462
  • Evalue 2.20e-127
Pseudouridine synthase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9X3_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 226.0
  • Bit_score: 462
  • Evalue 1.60e-127
Pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 226.0
  • Bit_score: 462
  • Evalue 4.40e-128

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Taxonomy

Azospirillum lipoferum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
GTGACACCCGCCCAAATCCAAGACCGCATCCTGTACCGTGACGGGCTGATGCTGATCCTCGACAAGCCCGCCGGGCTGCCGGTCCATGCCGGTCCCGCCGGCGGACCGAACCTGGAGCGGCATTTCGACGCGCTGCGCTTCGGCTTTCCCAAACCACCGTCACTGGCCCACCGGCTGGACCGCGACACGTCGGGCTGCCTGATCCTCGGCCGCCATGCCAAGGCGCTGCGCAAGATCGGCATCCTGTTCCAGAACGGCAAGGTCGACAAAACCTATTGGGCCGTGGTCGCCGGCACTCCGCCGCAGGAGTCCGGGCGGATCGATCTGCCGCTCGCCAAGGTCTCCAACAAGACCGGCGGCTGGCGCATCGTCGGCTCGCCCGACGGGCAGGCGGCGGTGACCGACTATGTCGTGCGTGGGCAGGCCGACGGGCTGACGTGGCTGGAACTGACGCCGCACACCGGCCGCACCCACCAGATCCGCGTCCATTGCGCCTCCATCGGCTGCCCGCTGGTCGGCGATCCGCAATATGGCGGGCCGGAGGGTAAGCCGCTGCACCTGCATTCCCGCGCCATCTCGCTGCCGCTCTACCCGAAGCGCGATCCGGTCGGCGCGGTGGCGCCGGTCCCGCCGCACATGCAGGCGGCGCTGGCCGCTTGCGGCTTTACCGAGGCTTCATAG
PROTEIN sequence
Length: 227
VTPAQIQDRILYRDGLMLILDKPAGLPVHAGPAGGPNLERHFDALRFGFPKPPSLAHRLDRDTSGCLILGRHAKALRKIGILFQNGKVDKTYWAVVAGTPPQESGRIDLPLAKVSNKTGGWRIVGSPDGQAAVTDYVVRGQADGLTWLELTPHTGRTHQIRVHCASIGCPLVGDPQYGGPEGKPLHLHSRAISLPLYPKRDPVGAVAPVPPHMQAALAACGFTEAS*