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2019_SCN_bioreactor_t3_planktonic_scaffold_62994_16

Organism: 2019_SCN_bioreactor_t3_planktonic_Klebsiella_oxytoca_56_23

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 ASCG 13 / 38 MC: 3
Location: 16500..18440

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein CsrD n=1 Tax=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) RepID=G8WK02_KLEOK similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 646.0
  • Bit_score: 1270
  • Evalue 0.0
RNase E specificity factor CsrD {ECO:0000313|EMBL:EWF61656.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 646.0
  • Bit_score: 1274
  • Evalue 0.0
regulatory protein CsrD similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 646.0
  • Bit_score: 1270
  • Evalue 0.0

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1941
ATGCGATTAACGACGAAATTCTCAGCGTTTGTCACGTTACTCACCAGCCTGACGATCTTTGTCACGCTGATTGGCGCTTCGCTGAGTTTTTATAACGGCATTCAGCTAAAAATGACCAACCGCGTTCAGGCGGTGGCGACCATGCTGGATAACCGTCTGGTCTCTATGTCTTTTGACCAGATTGAACCGCAGATGGATGAGCTGATGACGCCGATCGACGCGACGCGCGTTGACTTTCAGCTTAATGGCAAATCGGTCTATAGCCATTCCCGCACCGATAACTATCGTCCTTTAGGTAGCAGCAATCAGTTTCGCGATATCACGGTACCGTCGCTCAAGCAGCCCGGTATGGCAATCCATCTGGTGTACCTGGATCCGATGGCCAATTACTTCCGTTCACTGCACATCACCGCGCCGCTCTCCATCGCCATTGGTTTTATGGTGCTGATTATCTTTTTTTCCGTGCGCTGGATCCGTCGCCAGCTGGCGGGCCAGGAGCTACTGGAACTCCGCACTGCGCGTATTCTTAATGGCGAACGCGGACCGCAGGTGCGAGGGTCGGTACACGAGTGGCCAGCGAATACCAGTAGCGCGCTGGATATGCTGCTATCCGAACTTCAGTTCGCCAGCGATCAGCGAAGCCGCATGGATACCCTGATCCGTTCCTATGTCGCGCAGGATTCAAAAACCGGGCTGAGTAACCGATTATTTTTTGATAATCAGCTGTCGACGCTGCTTGAAGATCAGGAGAAAGTGGGGTCATACGGCATCGTAATGATGATCCGCCTGCCGGATTTCGACCTGCTGCGCGATAACTGGGGGCGCGCAGCGACCGAAGAGCACTACTTTACGCTGATCAACATGCTTTCCACTTTTATTATGCGCTACCCTGGCGCACTGCTGGCTCGCTACCACCGCAGCGATTTTGCCGTCCTGCTTCCGCATCGCACGTTGAAAGAGGCGGACAGCATTGCCGGGTTACTCCTGAAAGCCATGGATGCCCTGCCGCCGACGCGAATTCTCGATCGTGACGATATGATGCATATCGGGATCTGCGCTTTCCGCAGCGGACAAACGGCGGCCCAGGTAATGGAGCATGCGGAAGCGGCCACGCGTAATGCGGTGCTGCAGGGCAGCAACAGCTGGGCCGTCTATGACGATTCTCTGCCGGAGAAAGGGCGTGGCAACGTGCGCTGGCGTACGCTTATCGAGCAAATGCTTAGCCGCGGCGGCCCGCGACTTTACCAGAAACCCGCCGTCACTCGTGATGGTCGCGTACATCATCGTGAGCTAATGTGCCGTCTTTATGATGGTAAGGAAGAGGTGATTGCGGCCGAATATATGCCGATGGTGCTGCAGTTTGGCCTGGCGGAGGAGTATGACCGTTTGCAAATTACGCGATTGCTGCCGTTTTTAGGCTTTTGGCCGGAAGAAAACCTCGCGCTGCAGGTGATGGTCGAGTCCTTGATCCGCCCTCGATTCCAGCGCTGGCTGCGCGATACTTTGATGCAATGCGAAAAATCGCACCGTCGACGTATTATTTTTGAACTTGCAGAGGCGGATGTTTGTCAATATATCGGCCGCTTGCAGCCGGTTATGCGGTTGGTTAACGCTTTAGGTATTCGAATTGCCGTGGTTCAGGCCGGTTTGACGCTGGTCGGAACCAGCTGGATCAAGCAGCTCGATGTTGAAGTGATTAAGCTGCATTCGGGGTTATCGCGCAATATAGAAAAACGCAGTGAAAATCAGCTGCTGGTGCAGAGCCTGGTAGAAGCCTGTAAAGGAATGCCGGTTCAGGTTTTCGCAACCGGCGTACTCAGCCGAAGCGAGTGGCAGGTGCTGTCTCAATGCGGTGTTACCGGTGGCCAGGGGGAATTTTTTGCCGCCTCACAGCCACTTGACACAAATGTGAAAAAATATTCGCAAAGATACTCTGTTTGA
PROTEIN sequence
Length: 647
MRLTTKFSAFVTLLTSLTIFVTLIGASLSFYNGIQLKMTNRVQAVATMLDNRLVSMSFDQIEPQMDELMTPIDATRVDFQLNGKSVYSHSRTDNYRPLGSSNQFRDITVPSLKQPGMAIHLVYLDPMANYFRSLHITAPLSIAIGFMVLIIFFSVRWIRRQLAGQELLELRTARILNGERGPQVRGSVHEWPANTSSALDMLLSELQFASDQRSRMDTLIRSYVAQDSKTGLSNRLFFDNQLSTLLEDQEKVGSYGIVMMIRLPDFDLLRDNWGRAATEEHYFTLINMLSTFIMRYPGALLARYHRSDFAVLLPHRTLKEADSIAGLLLKAMDALPPTRILDRDDMMHIGICAFRSGQTAAQVMEHAEAATRNAVLQGSNSWAVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRDGRVHHRELMCRLYDGKEEVIAAEYMPMVLQFGLAEEYDRLQITRLLPFLGFWPEENLALQVMVESLIRPRFQRWLRDTLMQCEKSHRRRIIFELAEADVCQYIGRLQPVMRLVNALGIRIAVVQAGLTLVGTSWIKQLDVEVIKLHSGLSRNIEKRSENQLLVQSLVEACKGMPVQVFATGVLSRSEWQVLSQCGVTGGQGEFFAASQPLDTNVKKYSQRYSV*