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2019_SCN_bioreactor_t3_planktonic_scaffold_52247_134

Organism: 2019_SCN_bioreactor_t3_planktonic_Klebsiella_oxytoca_56_23

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 ASCG 13 / 38 MC: 3
Location: comp(143777..145765)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Klebsiella sp. OBRC7 RepID=J5WE09_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 662.0
  • Bit_score: 1339
  • Evalue 0.0
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 662.0
  • Bit_score: 1343
  • Evalue 0.0
5-methylaminomethyl-2-thiouridine-forming enzyme mnmC similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 662.0
  • Bit_score: 1337
  • Evalue 0.0

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1989
GTGAAACAAAACGCCATACAACCCGCCAACCTGGAATTCAACGCTGAGGGTACACCTGTTTCCCGAGATTTTGACGATGTCTACTTTTCCAATGACAACGGTCTGGAAGAGACGCGCTACGTTTTCCTCGACGGCAACCAGCTCAAGGAACGCTTCCCTGAGCATGCCCGTCCGTTCTTTGTGGTTGCCGAAAGCGGGTTCGGTACCGGCCTGAATTTCCTCACGCTGTGGCAGGCGTTTGACGTTTTTCACCGCGATAATCCAGAAGCTACCCTGCAAAGATTACATTTCATCAGTTTCGAAAAATTTCCGCTAAAAGCGGAGGACCTGCGCCTTGCCCACCAGCGCTGGCCGGAGCTTGCAACCTGGGCCGAGCAGCTGCAGGCGCAGTGGCCTCTGCCCATCGCGGGCTGTCATCGTCTGCTACTGGATGAAGGGCGGGTCACGCTGGATTTGTGGTTTGGCGATATTAATGAACTGACCAACGAGCTCGATGATTCGCTTAATCAGCAGGTGGACGCCTGGTTTCTTGATGGCTTTGCCCCGGCAAAAAACCCGGACATGTGGACGGCGGAGCTGTTTGCGGCGATGGCTCGTCTGGCCAGACCCGGCGGTACCCTGGCCACCTTCACCTCCGCCGGCTTTGTGCGCCGCGGCCTGCAGGAGGCGGGTTTCAGCATGCAGAAGCGCAAGGGTTTTGGCCGCAAGCGCGAAATGCTTATCGGCGAAATGCGTGAAATGCCGGAGATCCCCGCGCGTGCGCCGTGGTTTGCCCGCAGCGGTACGGAACAGCGCGATGCCGCGATTATCGGCGGGGGGATCGCCAGCGCCCTGCTCGCGCTGGCGCTGCTGCGCCGCGGATGGCTGGTAACGTTATACTGCGCCGACAGCGCGCCGGCTGAAGGCGCATCCGGAAACCGCCAGGGCGCGCTCTATCCGCTGCTCAGCCAGCACGATCCCGCCCTGGCCCGCTTCTTCCCGGCGGCATTTACTTTCGCCCGCCGCGTGTATGACGCTCTGCCGGTGATGTTCGATCATGACTGGTGCGGCGTGACGCAGCTGGGCTGGGATACGAAAAGCGCGCAGAAAATCGCCCAGATGATTGCGCTTAACCTGCCGCCGGAAATCGCCGTCGCCGTGGACGCCCGAACCACTGCGCAACAAACCGGTGTGGAAACCGGCTGCGGGGGCATCGCCTATCCTGCCGGCGGCTGGCTTTGTCCGCAGCAGTTAACCGCTGAACTGCTGGCCCTCGCCGCCACTCGCGGATTGCGCGTGCGCTACGATTATCCGGTCACGGATCTCAGCGCAGACAACAACGGCTGGCAATTAAACCAGCGGCAGTACCACGAGGTCGTGGTGCTGGCCAACGGCCATCAGCTGACCCGCTTTAGCCAGACGGAGCATCTTCCCATGTACCCGGTTGCCGGTCAGGTTAGCCATATTCCGACGACGCCAGGGCTATCGAAATTGCGCCAGGTCCTGTGCTACAACGGCTACCTGACGCCGCAAAACCCGCATAATCAGCAACACTGCATTGGCGCAAGCTACCACCGCGGACAGGCAGAGGCCGCGTTTAGCGCCGAGGATCAGCAGCAGAATCGCCAGCGCCTGATTGACTGTTTCCCGCAGGCGGAATGGACGCGGGAGGTAGACGTGAGCGCTAATCAGGCCCGCAGCGGCGTGCGCTGCGCAACCCGCGATCATTTGCCGATGGTCGGCAGCGTGCCTGATTATGAGGCCACCTTACGCGAATATGCCTCTCTGGCTGAACGTCCGGAGCAGGCCGGAGAAGCGCCGGTTTACCGCAACCTGTATATGCTGGGCGCTCTGGGCTCGCGCGGCCTGTGCTCCGCGCCGCTGGCGGCTGAAATTCTGGCGTCGCAAATGAGCAATGAGCCATTACCCATGGATAAAGAAACGCTGGCGGCGCTGAATCCTAACCGGCTGTGGGTAAGAAAACTGCTGAAAGGGAAAGCGGTGAAATAA
PROTEIN sequence
Length: 663
VKQNAIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLDGNQLKERFPEHARPFFVVAESGFGTGLNFLTLWQAFDVFHRDNPEATLQRLHFISFEKFPLKAEDLRLAHQRWPELATWAEQLQAQWPLPIAGCHRLLLDEGRVTLDLWFGDINELTNELDDSLNQQVDAWFLDGFAPAKNPDMWTAELFAAMARLARPGGTLATFTSAGFVRRGLQEAGFSMQKRKGFGRKREMLIGEMREMPEIPARAPWFARSGTEQRDAAIIGGGIASALLALALLRRGWLVTLYCADSAPAEGASGNRQGALYPLLSQHDPALARFFPAAFTFARRVYDALPVMFDHDWCGVTQLGWDTKSAQKIAQMIALNLPPEIAVAVDARTTAQQTGVETGCGGIAYPAGGWLCPQQLTAELLALAATRGLRVRYDYPVTDLSADNNGWQLNQRQYHEVVVLANGHQLTRFSQTEHLPMYPVAGQVSHIPTTPGLSKLRQVLCYNGYLTPQNPHNQQHCIGASYHRGQAEAAFSAEDQQQNRQRLIDCFPQAEWTREVDVSANQARSGVRCATRDHLPMVGSVPDYEATLREYASLAERPEQAGEAPVYRNLYMLGALGSRGLCSAPLAAEILASQMSNEPLPMDKETLAALNPNRLWVRKLLKGKAVK*