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2019_SCN_bioreactor_t3_planktonic_scaffold_109641_26

Organism: 2019_SCN_bioreactor_t3_planktonic_Klebsiella_oxytoca_56_23

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 ASCG 13 / 38 MC: 3
Location: comp(27982..29112)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC {ECO:0000256|HAMAP-Rule:MF_01012, ECO:0000256|SAAS:SAAS00055322}; EC=2.1.1.189 {ECO:0000256|HAMAP-Rule:MF_01012, ECO:0000256|SAAS:SAAS00055340};; 23S rRNA(m5U747)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01012}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 376.0
  • Bit_score: 759
  • Evalue 1.40e-216
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC n=1 Tax=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) RepID=G8WIH5_KLEOK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 376.0
  • Bit_score: 761
  • Evalue 2.10e-217
rumB; 23S rRNA methyluridine methyltransferase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 376.0
  • Bit_score: 761
  • Evalue 5.90e-218

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGCATTGCGCACTTTATGACGCGGGCCGCTGCCGCTCCTGCCAGTGGCTGGAACTGCCGGTATCCCAACAGCTCGCCGATAAAATGGCCGATCTTCGCGCGCTTCTCGCCGATGCGCCCGTCGCTGAATGGTGCGCACCGGTTTGCGGGCCGGAAAGCGGGTTTCGCAACAAAGCGAAAATGGTGGTCAGCGGTAGCGTGGAGCGCCCATTGCTGGGGATGCTGCACCGTGATGGCGCCCCGGAAGACCTGACCGACTGTCCGCTTTATCCGCAAAGCTTCGCGCCCGTCTTCGCTGCGCTCAAGCCGTTTATCGCCCGCGCCGGGCTCACGCCCTATAACGTTGCCCGCAGGCGCGGAGAGCTGAAGTACATTCTGCTGACCGAAAGCCGGCTCGACGGCGGTATGATGCTGCGCTTTGTCCTGCGTTCGGAGAGCAAGCTTGCCCAGCTGCGCGCCGCGCTGCCGGAGCTTCAGGCGCTGCTGCCGCAGCTGCAGGTGATTACCGCCAATATTCAGCCGGTGCATATGGCCATCATGGAAGGAGAGCGGGAAATTTTCCTCACCGACCAGCAGGCGCTGGCGGAAAATTTCAACGGCGTGCCGCTGTGGATCCGCCCGCAAAGCTTCTTTCAGACCAACCCGGCGGTGGCCAGCCGCCTGTATGCCACCGCTCGTGACTGGGTGCGCCAGCTGCCGGTCAACCATATGTGGGATCTCTTCTGCGGGGTGGGCGGCTTTGGTCTGCACAGCGCAACGCCTGAGATGCGCCTGACCGGGATTGAAATTGCCCCGGAGGCGATCGCCTGCGCGAAGCAGTCGGCGGCGCAGCTCGGGCTGAATAATCTGCATTTTCAGGCGCTCGATTCCACGCAGTTTGCGACCGGCGAAGGCGATATTCCCGATCTGGTGCTGGTGAATCCGCCGCGTCGCGGTATCGGCGACGGCCTGTGCGACTATTTAAACCGTATGGCGCCAGGCTTTATTATCTACTCCAGCTGCAACGCCCGGACGATGGCGAAAGATATCGCTCGCCTGGCCGGTTATCGCATTGAGCGCGTCCAGCTGTTCGATATGTTCCCCCATACCGCCCACTATGAGGTGCTGAGCCTGCTGGTTCGCGAAGTATAA
PROTEIN sequence
Length: 377
MHCALYDAGRCRSCQWLELPVSQQLADKMADLRALLADAPVAEWCAPVCGPESGFRNKAKMVVSGSVERPLLGMLHRDGAPEDLTDCPLYPQSFAPVFAALKPFIARAGLTPYNVARRRGELKYILLTESRLDGGMMLRFVLRSESKLAQLRAALPELQALLPQLQVITANIQPVHMAIMEGEREIFLTDQQALAENFNGVPLWIRPQSFFQTNPAVASRLYATARDWVRQLPVNHMWDLFCGVGGFGLHSATPEMRLTGIEIAPEAIACAKQSAAQLGLNNLHFQALDSTQFATGEGDIPDLVLVNPPRRGIGDGLCDYLNRMAPGFIIYSSCNARTMAKDIARLAGYRIERVQLFDMFPHTAHYEVLSLLVREV*