ggKbase home page

bjp_ig2599_scaffold_1690_2

Organism: BJP_ig2599_Miz_0z1_300_2014_Parcubacteria_38_329

near complete RP 36 / 55 MC: 1 BSCG 42 / 51 ASCG 8 / 38
Location: comp(766..1896)

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_02_OD1_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 382.0
  • Bit_score: 517
  • Evalue 1.60e-143
RNA polymerase sigma factor id=2669954 bin=GWA1_ZB2_49_26 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 375.0
  • Bit_score: 487
  • Evalue 9.90e-135
RNA polymerase, sigma 70 subunit, rpod subfamily similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 383.0
  • Bit_score: 389
  • Evalue 7.90e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_41_19 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGAAAAAAAAGAAAAAAATTATAAAAAAACCTGTTAAAAAGAAGGCAAGAAAACCGGGCAAAAAGGCCCGACTCATTCAAGAAAAAGTAAGCAGACTTTTGGAAAAAGGCCACTTGCGCGGTTTTGTCACTTATTCAGAAATTTTGAAAGAATTTCCCGATATAGAAAAGGACATTTTCTTTCTAGACGATCTCTATGGAAGACTGCAAGCAGAAAACATAGATGTTTTGGAAGGGAAAGAACTGCTTTCTTTGGAGAGTGAAAAAACCGATAAAGAACTGGAGGAGAGTCTGGATCAGAAATCATTGGATGTCATTCAAATGTATCTTAAGGAAATAGGCAAGATTTCTCTAATTGACGCCAATGAAGAGAGGGAACTCGCCAAGAGGATAGAAAAAGGAGACGAAGAGGCGAAAAACAGATTAATAAGAGCCAACCTGCGCTTGGTTGTTTCCATTGCCAAAAGATATATAGGCCGAAGCCCGGACCTGACTCTTTTGGACTTGATCCAGGAGGGGAATCTCGGCCTTTTTAAGGCAGTGGAAAAATTTGACTGGCGGAGGGGCTTCAAATTTTCCACCTATGCCACTTGGTGGATAAGGCAGGCCGTTACCAGAGCCATTGCTGACCAGGCCCGCACCATTAGAATTCCCGTGCATATGGTTGAAACAATTACCAAGTATAAGCAGGTATCAAGAAGATTGGCACAGGATTTAGGCAGGGATCCTTTGCCAGAAGAAATTGCCGCTGAGATGAATATAGATGTGGAAAAAGTTCATCATATTCAGAAGATTGACCAAGAAACGATATCCTTGGAAACGCCGATCGGAGATGAAGGCGATGAGTCCACTTTGGCAGAATTTATTCGGGAAGAAAAAATTCCTTCTCCGGATCAGGACGCAGCCCTAAAATTATTAGGCGATCAGATCAGAGAAATTCTGCAGGATCTTAATGAAAAGGAACAGAAAATTTTAATGCTACGTTTTGGATTAAAGGACGGGGTAACCCATACTTTGGAGGAAGTGGGGAAAGAATTTGGAGTTACCAGGGAGCGTATCAGGCAGATTGAAGCCAAGGCCATAGAAAGAATCCGCCAGCATGAAAAACTCCGCAAACTGGAGAGTTATTAG
PROTEIN sequence
Length: 377
MKKKKKIIKKPVKKKARKPGKKARLIQEKVSRLLEKGHLRGFVTYSEILKEFPDIEKDIFFLDDLYGRLQAENIDVLEGKELLSLESEKTDKELEESLDQKSLDVIQMYLKEIGKISLIDANEERELAKRIEKGDEEAKNRLIRANLRLVVSIAKRYIGRSPDLTLLDLIQEGNLGLFKAVEKFDWRRGFKFSTYATWWIRQAVTRAIADQARTIRIPVHMVETITKYKQVSRRLAQDLGRDPLPEEIAAEMNIDVEKVHHIQKIDQETISLETPIGDEGDESTLAEFIREEKIPSPDQDAALKLLGDQIREILQDLNEKEQKILMLRFGLKDGVTHTLEEVGKEFGVTRERIRQIEAKAIERIRQHEKLRKLESY*