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OR_10152018_dam_0_1um_scaffold_3437_2

Organism: OR_10152018_dam_0_1um_Bacteroidetes_47_5

near complete RP 45 / 55 MC: 6 BSCG 44 / 51 MC: 8 ASCG 12 / 38 MC: 3
Location: comp(462..1253)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix-domain containing protein AraC type id=4402575 bin=GWA2_Flavobacterium_35_26 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds similarity UNIREF
DB: UNIREF100
  • Identity: 31.4
  • Coverage: 261.0
  • Bit_score: 130
  • Evalue 1.60e-27
Helix-turn-helix-domain containing protein, AraC type {ECO:0000313|EMBL:EOZ93284.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.1
  • Coverage: 227.0
  • Bit_score: 80
  • Evalue 3.60e-12
regulatory helix-turn-helix protein, AraC family similarity KEGG
DB: KEGG
  • Identity: 31.7
  • Coverage: 120.0
  • Bit_score: 64
  • Evalue 4.10e-08

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Taxonomy

Indibacter alkaliphilus → Indibacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 792
ATGCTATTATTAGCGACAGCGCTAGGAATGTTGACGTCTATGATCCTGTTTGCTTTCAGCAATGCAGGTAATAAAATGAATCGCTACCTGGCCACCTACTTTTTTATTGTTTCACTGTATGCGCTGGTACATTATGTAACTGTTTATAGCGGTAATACCTTCTGGATCGCTGTTTGTTTTATCAATCCCGGTTTCCTGTTCCTGCTGCCGGGACCAATCCTGTATTTTTATGTACGTGGCATTTTAACAGGCACAACAGGGCTCAGCAAAAAAGACTGGATCCATTTTGCACCTGCGGTATTGCATTTTTTTGTTCTTATTCCCTGGCTGCTGACAGATTTCGCCAACAAAGAAGCACTGGCCAGAATCGTTATAGAGACACCGGAAAGTGTTTTTGAGAACGATTATTTCAAACCAGTGATCCCGTTTTTCAGCAGTTTCCTGCTGCGGTCATTATCCGGCGCGGGATATGCCGCTTACTGCATAACGCTTATCTATAAACATCACCAGCATAAAGTAGATATTACCAACCGGCAACAGCACAGCGCTGTAGTATGGCTTAACCTGTTTGTTTTTTCGCAGGCAATTTTATTCCTGGCTTATATGGTCAGCGTTATCATTACTTATCATGACAATATGCAATCCCTGCTTTACGGGCACAGTTCCCTGTTTCATATTTCGCAGGGAATGGTACTGGGTATACTGCAGATCATTTTCCTGATCTTTCCCTGGGCGTTATATGGCGTACCCAGGCGTTTGCGTACGGCGAACTTACATAGTTCCATTATTTAG
PROTEIN sequence
Length: 264
MLLLATALGMLTSMILFAFSNAGNKMNRYLATYFFIVSLYALVHYVTVYSGNTFWIAVCFINPGFLFLLPGPILYFYVRGILTGTTGLSKKDWIHFAPAVLHFFVLIPWLLTDFANKEALARIVIETPESVFENDYFKPVIPFFSSFLLRSLSGAGYAAYCITLIYKHHQHKVDITNRQQHSAVVWLNLFVFSQAILFLAYMVSVIITYHDNMQSLLYGHSSLFHISQGMVLGILQIIFLIFPWALYGVPRRLRTANLHSSII*