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2019_SCN_bioreactor_t3_biofilm_scaffold_449_2

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(450..1262)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z6P5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 270.0
  • Bit_score: 465
  • Evalue 2.20e-128
Lipopolysaccharide ABC transporter, ATP-binding protein lptB {ECO:0000313|EMBL:GAO54434.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 270.0
  • Bit_score: 525
  • Evalue 3.30e-146
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 253.0
  • Bit_score: 464
  • Evalue 1.10e-128

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGACAGCCCTTGCCGACACCACGCCCGCCGACAGCGGGCAAACGCCGGGATCGGCCCCAGGATCGAACGACACCTCGCCTCCCTTGCCGCAGGGCGGGCTGGAAGTGGTGTCGATCGCCAAGAGCTACGACAAGCGCGCGGTCCTGACCGATATCTCGCTGTCCGTGGGCAAGGGCGAAGTGCTGGGCCTGCTGGGGCCGAACGGCGCGGGCAAGACCACCTGCTTCTATTCGATCATGGGGCTGGTGCGCCCGGATTCGGGCCGCATCCTGCTGGATGGCGTGGATATCACCCGCCTGCCGATGTACCGCCGCGCGATCCTGGGCCTGGGCTATCTGCCGCAGGAAACCTCGATCTTTCGGGGCATGACGGTGGAACAGAACATCGCCACCGTGCTGGAGCTGATCGAACCGGACAAGGCCACGCGCATGGCCGAACTCGATCGCCTGCTGGACGAATTCGGCCTGACGCGCCTGCGCTCCAGCCCGGCCATGGCGCTTTCGGGCGGCGAACGGCGCCGCTGCGAAATCGCCCGCGCCCTGGCCGCCAAGCCATCGATCATCCTGCTCGACGAACCCTTCGCCGGGATCGACCCGCTGTCGATCAGCGACATCCGCCACCTGGTCAAGGACCTCAAGCGGCGCGGCATCGGCGTGCTCATCACCGACCACAACGTGCGCGAAACGCTCGATATCGTGGACCGCGCCTGCATCATCTATGGCGGGCAGGTGCTGTTCGCGGGCAGCCCCGAAGCGCTGGTGGCCGATCCCAACGTGCGCCGCCTCTATCTGGGCGAGGGCTTCACGCTCTGA
PROTEIN sequence
Length: 271
MTALADTTPADSGQTPGSAPGSNDTSPPLPQGGLEVVSIAKSYDKRAVLTDISLSVGKGEVLGLLGPNGAGKTTCFYSIMGLVRPDSGRILLDGVDITRLPMYRRAILGLGYLPQETSIFRGMTVEQNIATVLELIEPDKATRMAELDRLLDEFGLTRLRSSPAMALSGGERRRCEIARALAAKPSIILLDEPFAGIDPLSISDIRHLVKDLKRRGIGVLITDHNVRETLDIVDRACIIYGGQVLFAGSPEALVADPNVRRLYLGEGFTL*