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2019_SCN_bioreactor_t3_biofilm_scaffold_5458_10

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 12556..13851

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00035DCF1A similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 416.0
  • Bit_score: 561
  • Evalue 4.70e-157
Type I secretion outer membrane protein, tolC {ECO:0000313|EMBL:GAO53631.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 401.0
  • Bit_score: 760
  • Evalue 7.40e-217
TolC family type I secretion outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 418.0
  • Bit_score: 345
  • Evalue 1.50e-92

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1296
ATGCCCCGCCTGATGCCGCCCAGGTTGCTCCCGGCCCTGTCGTTGCCGCTGTCCTGCCTGCTCTCCTGCGCCCTAGCCGTTCCCCCAGCCATGGCGCAGGACCTCGCCGCCGCCATCGCCGATGCCCTCGCCAACGCACCCGTGCTGGCCGAGGCCAATGCGGGCGAGGCGGCGGCGAAAGCCCGGCTGGATCGGGCGCGGGCGGAAAGCAACCCGCTCCTGCGGGTCGAAGGGTCCTATGGCGCCGGCCGGATCGACAACGGCGGCTTTTTCGGGATCACGGCGGACAATGTGAATCCGCTGGCCCTGCAGGCCACGGCGGAACTGCCGCTCTATGCGGGTGGGCGGGTGTCGTCCGCCATCGATCAGGCGCGTGGCGGCGCGGCGATGGCGCACTTCGGCGCCGAACAGGCGCGGTTGCAGACCATCGTCACGGCTGTCGGCACCTATACCGAGGTGCTGACGGCGCGAAAGCTCGAGGCGCGCTATGGCCAGCTTGTCGAGGAACTGACGGAAACCGAACGCCAGGCGGGCCTGCGCTTCCGGGCGGGTGAAATCGCGAGTTCGGACCTCGCCCAGGCGCGAGCCCGGAAGGCCGAAGCCGATGCGGGTTTCGCGCAGGCGCATGGCCGTCGGACGTCGGCGGAAGCGACCTACCAGCGCCTTACCGGGAAGCCGGCGGGCGATCTGGCGCCGCTTGCCGAGCCGCCCGCCGTGCCGCCGACGCTCGACGAAGCCATGGACATGGCCCGCGCGTCCAATCCCGCGCTCCGCCAGGCCCAGGCGGGCGTCGATGTCGCGCGGGCCGGCACCCGTTCGGCGCGGGCCGAGGGCATGCCGACGGTGGGCGCCTTTGCCGAAGCCGGGCATGTGCGCGACCAGTTCTTCCCCGGCTACAAGGCCGATACGGTCGCCGTGGGCATCAGGGGCCGCTGGACGCTGTGGGCGGGTGGGCGCGTATCTTCGCAGGTCCGTGCCGCCGATGCCGATCTCGATGCCAGCGAGGCCCGGTTGCGTCAGGCCGAACAAGGGCTTGCGGGCATGGTAATCGATGCGTGGCAGGGTCTTGCGACCGCGCGGCGCATGACGGAGGCTTCCCGGCTGCGCCGCGATGCGGCCACGGAAGCGCTGCGCGGGACGCAACTGGAAGCGCGCGTGGGGGCGAAGCCGCCACTGGCCGTGCTTGACGCCGAACGCGAGGCGATCGAGGCCGAAGCCGCCCTGCTGCAGGCGGAAGGCATGCAGACCGTGGCGGCATGGCGGCTCAACGCGCTGACCGGGAATATCGCGCCATAA
PROTEIN sequence
Length: 432
MPRLMPPRLLPALSLPLSCLLSCALAVPPAMAQDLAAAIADALANAPVLAEANAGEAAAKARLDRARAESNPLLRVEGSYGAGRIDNGGFFGITADNVNPLALQATAELPLYAGGRVSSAIDQARGGAAMAHFGAEQARLQTIVTAVGTYTEVLTARKLEARYGQLVEELTETERQAGLRFRAGEIASSDLAQARARKAEADAGFAQAHGRRTSAEATYQRLTGKPAGDLAPLAEPPAVPPTLDEAMDMARASNPALRQAQAGVDVARAGTRSARAEGMPTVGAFAEAGHVRDQFFPGYKADTVAVGIRGRWTLWAGGRVSSQVRAADADLDASEARLRQAEQGLAGMVIDAWQGLATARRMTEASRLRRDAATEALRGTQLEARVGAKPPLAVLDAEREAIEAEAALLQAEGMQTVAAWRLNALTGNIAP*