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2019_SCN_bioreactor_t3_biofilm_scaffold_5458_11

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(13921..15129)

Top 3 Functional Annotations

Value Algorithm Source
NADH dehydrogenase {ECO:0000313|EMBL:GAO53630.1}; EC=1.6.99.3 {ECO:0000313|EMBL:GAO53630.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 402.0
  • Bit_score: 788
  • Evalue 3.10e-225
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IDB8_BEII9 similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 402.0
  • Bit_score: 588
  • Evalue 3.40e-165
FAD-dependent pyridine nucleotide-disulfide oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 402.0
  • Bit_score: 588
  • Evalue 9.50e-166

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1209
ATGACCCAGAAGATCGTGATTGCCGGAACCGGATTTGCCGGTGTCTGGGCAGCCCTTTCCGCCAGCCGCGCCATCGCGCTTGCCGGCAGGCAGCAGGACGTGGAGGTGATCGTCATCTCGCCCGCCCCCGCGCTCGTCATTCGCCCGCGCCTTTACGAAGCCGTGCTCGACAACATGAATCCCGATGTCGGCGCGCTGCTCGCCGCCGTGGGCGCACGGCACCTTGCCGGCCGCGTCGAGACCATCGATGTCAACAGTCGCACTGTCACCGTGGCACGGAGCGACGGGGAGCGCGAAACGATCGCCTATGACCGCTTCGTTCTCGCCGCCGGCAGCCAGCTGTTCCGCCCGGATGTCCCCGGCCTTGACCGCCATGCGTTCGACACCGACCAGTTCGCCACCGCCCGCGCACTGGACGTGCAGCTGAAGGCACTGCCCGGCGAGCCCGAGACGGAGGCGCGCAATACCGTCGTCGTCGCCGGCGGCGGGCTGACCGGCTTCGAGGCGGCGACGGAAATGCCGATCCGGCTGCGCGCCGCGCTGGGGGACAAGGCAAACTTCCGCGTCATCCTGATCGACACGGCGGATCGCCCCGGCGGATCGCTGGGGGACGAGGCGCAGCCCCATCTCGCCGAAGCGCTGGCCTTCACCGGCGTCGAAACGCGGACGGGCGTGCGGGTCACCGCGATCGAGGCGGACGCCGTGGTCCTCTCTTCCGGCGAACGGATCGCGACCAATACCGTCGTCTGGACCGCGGGCATGCGCGCCAGTCCGCTGGCGGCGCAGATCCCCGGCGAACATGACGCGATCGGCCGCGTCGTCGGCGATGCCTATCTGCGTGCGCCCGCCGCGCCGGGCGTGTTCGTGACGGGCGATACGGTGCACGCCGGCACGGACGATGACGGCAATGTCGCCCCGATGTCGTGCCAGCACGCGCTGAGCCTGGGGCGCGTGGCGGGGCACAACGCCGCCGCCGAACTGGTCGGTCTGCCGCTGCATCCCTATAGCCAGCCCAAGTACGTGACCTGTATCGACCTGGGCGACTGGGGCGCGCTCTACACCGAAGGCTGGGACCGGCAGGTGCGGATCACGCGCGAGGCGGCCAAGGCGATCAAGCAGGAGATCAACCGCGTGTGGATCTACCCGCCCGCCGCAGACCGCGACGCCGTGTTCGCCGTCGCCAATCCCGACTACGTCATCGTGCCCTGA
PROTEIN sequence
Length: 403
MTQKIVIAGTGFAGVWAALSASRAIALAGRQQDVEVIVISPAPALVIRPRLYEAVLDNMNPDVGALLAAVGARHLAGRVETIDVNSRTVTVARSDGERETIAYDRFVLAAGSQLFRPDVPGLDRHAFDTDQFATARALDVQLKALPGEPETEARNTVVVAGGGLTGFEAATEMPIRLRAALGDKANFRVILIDTADRPGGSLGDEAQPHLAEALAFTGVETRTGVRVTAIEADAVVLSSGERIATNTVVWTAGMRASPLAAQIPGEHDAIGRVVGDAYLRAPAAPGVFVTGDTVHAGTDDDGNVAPMSCQHALSLGRVAGHNAAAELVGLPLHPYSQPKYVTCIDLGDWGALYTEGWDRQVRITREAAKAIKQEINRVWIYPPAADRDAVFAVANPDYVIVP*