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2019_SCN_bioreactor_t3_biofilm_scaffold_5458_15

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(17476..19629)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dasania marina RepID=UPI0003776F35 similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 764.0
  • Bit_score: 503
  • Evalue 2.50e-139
Uncharacterized protein {ECO:0000313|EMBL:GAO53627.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 717.0
  • Bit_score: 1401
  • Evalue 0.0
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 724.0
  • Bit_score: 410
  • Evalue 8.30e-112

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2154
ATGTGGGGAACCCATCGCGGCGCGGCGCTGCTCGCCATTTGCGCCGCCGGAATCGCCGCCTCGCACGCCCTTGCCGCCGAGCCGGCGGAGACAGGCGTACAGGATAGCGGCGCGCTCGACACCATCGTCGTCGTCGCGCGCAAGCGGCAGGAAAACGTGCAGAGCGTGCCGATCTCGATCACCGCGCTGACCGGTGCGGCGCTGCAGCAGCGCGGCGTGGCGCGCGTGGGCGACCTGATCGGCACGGTCCCCAACCTTACCCAGGACGGCGGCGGTTCGGTGCTCGGCGCGATGGGCATTCGCGGCATCGTTTCGCAGACGCGCAACATCGGCTTCGACAGCGGGCTTGGCGTCTATGTCGACGGCGTGCTGACCGTGCGCCCCAACGCGGCGGACCAGGAACTGCCGGACATCGCCACGCTGGAAGTGCTGCGCGGGCCGCAAGGCACGCTGTTCGGGCGCAACACCACCGCCGGCGCGATCAACATCACCACGCGCAAGCCGAGCCTGGACGGCATCGAGGCCAATGCGCGCACCGCCTTCGGCAATCTGGGCACGATCGAGGCCAACCTGTTCGCGACCGCGCCAATCGTGACCGACCGGCTGGGCGTGAAGATTGCCGGCTCCATCGCCACGCGCGACGGCTATATCACCAACCTCTTCGACGGCTCGAAGCTCAACAACCTCAACCGCAAGTCGCTGCGCGGCGGCCTGCTGTGGAAGCCGACCGAGACGCTGGAAGTCGCGCTTTCGGGAAGCTGGCTCAAGCAGGCCGACCGGCTGCTGCTGGGCCAGGTGGCCGACAACACTTCCGGCGGTCTTGCCGGGCTGCCGGGCTACTTCACCGATCCTTACACCGTCTCGCAGGACCATCCCAGCCTGCAGAGCCGCGAGATCTGGAGCACCAACCTCAACCTCGACTGGCACGTCGGCGGCTTCACGGTCACCTCGATCAGCGCCTATGGCGACAATCGATCACGCCTGATCGACGATGACGACGCCCGCCCGATCCCGCTGTCCACGTCCGACTTTCAGGACCGCGCCCGCCAGTTCACGCAGGAACTGCGGCTGGCTTCGCCCACGGGCGGCAAGATCGATTACCTGATCGGCCTGTACTACCTGCACCAGGATGCCGACGCCAACCGCGCCACCACGGTCAACGGCCCGCCGGGACCGGCCGCCTTCATCGGCGCGATCTCCAGCATCTCGAACCTCAGGACCAATGCCTATGCCGCGTTCGCCAGCGCCAACTGGCGGCCGCTGCCGGGCCTGACGATCAGCGGCGGCCTGCGCATCAACACCGAGAGCAAGGATCTGGTGTTCGACCAGACCAATTCCTCGTTCGTGCCGCTGCCGAACCTGTCCGCGCGCCTGCACCGCAAGGACAGCAACCTTTCGGGCAACGCCAGCGTCTCCTACGAAGTCGTGCCGGACACCCGCCTCTACGTAAGCGCCGCGCGCGGCTTCAAGAGCGGCGGCTTCAACCCGGACATCGTCGGCAGCACCGACATCAGCTTCGGCCCGGAAAAGGCGTGGTCGTTCGAGGCGGGCATCAAGTCCGATCTGTTCGACCACAAGCTGCGCATTAACGCGGCGGGCTTCTACACCGACTACAAGGACCTGCAGGTATCCGCGCTGGTCGGCGCGGCCTTCCAGATCCGCAATGCGGCGGCAGCGCATATCAAGGGCTTCGAAGTGGAAGTCACCGCCCGGCCGGTGCGCGCGCTCGAACTCAACGCGGGCGCGGGCTATACCGACGCGACCTATGCCGATTTCCCCGGCTGTGCCCCGGCCACGAACTGCGCCGGGCAGCGCCTGCCGTTCGTGCCCAAGCTCTCGCTCAACGCCGGCGCGCAAGTGACGCAACCGCTTGGCGACGGGCACCTGACCGGACGGCTGGACCTGTCGTGGCGGAGCGGCATCTACTACGAGGCGACCAACACGCCCGACGGCCGGCTGCCCGGCTACGTGCTGGTCAACGGGCGGCTGGGCTACAGCTTCGCCGGCGACCGGCTGACCATCGCCATGTTCGGCCGCAACCTGTTTGACAACCGCTACCGCGACTACTCGTTCTACCTCGCTCCCTTCGCCGAACGGCTGGTGCGCTGGGCGCCACCGCGCACCTACGGCATCGAAATGACCACACGCTTCTGA
PROTEIN sequence
Length: 718
MWGTHRGAALLAICAAGIAASHALAAEPAETGVQDSGALDTIVVVARKRQENVQSVPISITALTGAALQQRGVARVGDLIGTVPNLTQDGGGSVLGAMGIRGIVSQTRNIGFDSGLGVYVDGVLTVRPNAADQELPDIATLEVLRGPQGTLFGRNTTAGAINITTRKPSLDGIEANARTAFGNLGTIEANLFATAPIVTDRLGVKIAGSIATRDGYITNLFDGSKLNNLNRKSLRGGLLWKPTETLEVALSGSWLKQADRLLLGQVADNTSGGLAGLPGYFTDPYTVSQDHPSLQSREIWSTNLNLDWHVGGFTVTSISAYGDNRSRLIDDDDARPIPLSTSDFQDRARQFTQELRLASPTGGKIDYLIGLYYLHQDADANRATTVNGPPGPAAFIGAISSISNLRTNAYAAFASANWRPLPGLTISGGLRINTESKDLVFDQTNSSFVPLPNLSARLHRKDSNLSGNASVSYEVVPDTRLYVSAARGFKSGGFNPDIVGSTDISFGPEKAWSFEAGIKSDLFDHKLRINAAGFYTDYKDLQVSALVGAAFQIRNAAAAHIKGFEVEVTARPVRALELNAGAGYTDATYADFPGCAPATNCAGQRLPFVPKLSLNAGAQVTQPLGDGHLTGRLDLSWRSGIYYEATNTPDGRLPGYVLVNGRLGYSFAGDRLTIAMFGRNLFDNRYRDYSFYLAPFAERLVRWAPPRTYGIEMTTRF*