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2019_SCN_bioreactor_t3_biofilm_scaffold_5458_27

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 36148..37134

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XFG0_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 327.0
  • Bit_score: 473
  • Evalue 1.70e-130
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:GAO53615.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 328.0
  • Bit_score: 658
  • Evalue 3.00e-186
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 327.0
  • Bit_score: 473
  • Evalue 4.70e-131

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGCTAGCCGTCCTTGCCCAGTCGAATGTCGCCGGTGTTCAGTCCTTCCATTCGGATCGGGCGGACGTGGTCCACGAACACCTGTCGAAGCGCCTTTCGCGCCACCGCTTCGATTGCGGCCGGGCGGAGCCGATCGATGCGCGCATCTACAGCATGGAACTCGGCGCGATCCAGTTCGTCGATCTGCAGTACGGCACCGAGGTCGATGTCGAGGCGCAGCTGGAGGACGATCACTTCCTGGTCCATCTCGCGCTCGATGGCGAAACTGTGATGTGGGCCGATGGCTACCGCTACCAGCTGCGGCCCGATGAACTGATGGTGTCCTCGCCCGGCACGCCGCTCAAGGTCCACATGACGGGCAACTGCCGCCACCTCGCGGTGCGGATGCCCGCGTCGATCTGCACCGATTATCTCGGCCAGCAGCTCCACATCCCGGTCCAGCGCCGCCTGGAATTCTACCCGGGGCGCGAAGGCACGCGCGAACTGCCGCTGGTGTGGCGCGGGATGCTGACCCACATCTGCGGGCAGTTGCAGCTTTGCCCGATTACGATGGGCAACAAGCGGCTGCAACGCCAGTACGGGATGCTGCTCGCCGAAGTGCTGCTCGGCAATTACTGCAACAGCTATTCCGAACAGATTGCGCTCCACGGCAACGACATCTCGCCCCGCCACGTCCGCCGCGCGCGCGAGATCATCCACGATTCGGTGGAGGAGACGATTTCGATCGCCGCGCTGGCGGCGCAGGTCGGCGTTTCGGTGCGTTCGCTGCAAAGCGGCTTCCGCCACTTCCTGGGCGTAACGCCGCTGGAATACGTCCGCCGCCACCGGCTGGAAAAGCTGCACAGCGCGCTGATGGAAAGCGATGGCGCCGCCAGCGTGACCGAACTGATGCTCGAATGCGGTATCGTCAATTTCGGCCGCTACGCGCAGTATTATCGCCAGCAGTACGGCTGCCTCCCCTCGGAAACCCTGCGCAAGCGGGGATAG
PROTEIN sequence
Length: 329
MLAVLAQSNVAGVQSFHSDRADVVHEHLSKRLSRHRFDCGRAEPIDARIYSMELGAIQFVDLQYGTEVDVEAQLEDDHFLVHLALDGETVMWADGYRYQLRPDELMVSSPGTPLKVHMTGNCRHLAVRMPASICTDYLGQQLHIPVQRRLEFYPGREGTRELPLVWRGMLTHICGQLQLCPITMGNKRLQRQYGMLLAEVLLGNYCNSYSEQIALHGNDISPRHVRRAREIIHDSVEETISIAALAAQVGVSVRSLQSGFRHFLGVTPLEYVRRHRLEKLHSALMESDGAASVTELMLECGIVNFGRYAQYYRQQYGCLPSETLRKRG*