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2019_SCN_bioreactor_t3_biofilm_scaffold_16101_3

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(907..1359)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator (MarR family protein) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T7M0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 150.0
  • Bit_score: 176
  • Evalue 1.50e-41
Transcriptional regulator of marR family {ECO:0000313|EMBL:GAO53313.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 150.0
  • Bit_score: 278
  • Evalue 3.00e-72
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 150.0
  • Bit_score: 168
  • Evalue 1.10e-39

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGGCTGCTGTTTCCGACCTTACCGCCCATACGGGTTATCTTTTGCGCATGGTGTCGAACGCGGTCTCGCAGGAGTTCGCGCGGAAGGTGGCGGGCGAAGGTGTGACGGTGGCTGAATGGGTGATGCTGCGCTCACTCTATGGCGGCGAAGCTGTCGCACCGTCGGCTCTGGCCGGCAGGATGGGTATGACCAGGGGAGCGATCAGCAAGCTCGCTGACCGGTTAGAGGCGAAAGGACTGATCGAACGCGCCGGCAACCCGGATGATAAGCGCGCGCAACGCCTTTCACTGTCGACCGTCGGGGCTGAGAAGGTGCCGGCGCTTGCTCACCTTGCCGATGAGAACGACGCCGTCTTTCTCGCTGCCCTGACCGGTAAGGAGCAGGAAAGCCTGCGTGCACTGCTGCACACCCTGATCGACAAGCACAAGCTGTCGGCCATGCCCGTCGATTGA
PROTEIN sequence
Length: 151
MAAVSDLTAHTGYLLRMVSNAVSQEFARKVAGEGVTVAEWVMLRSLYGGEAVAPSALAGRMGMTRGAISKLADRLEAKGLIERAGNPDDKRAQRLSLSTVGAEKVPALAHLADENDAVFLAALTGKEQESLRALLHTLIDKHKLSAMPVD*