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2019_SCN_bioreactor_t3_biofilm_scaffold_19966_16

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 16741..17982

Top 3 Functional Annotations

Value Algorithm Source
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7G8_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 413.0
  • Bit_score: 698
  • Evalue 4.00e-198
Lipoprotein releasing system transmembrane protein lolC {ECO:0000313|EMBL:GAO55683.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 413.0
  • Bit_score: 785
  • Evalue 2.10e-224
LolC/E family lipoprotein releasing system, transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 413.0
  • Bit_score: 698
  • Evalue 1.10e-198

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
TTGATCCTCAACACCTTCGAATGGACCATCGCCAAGCGCTACATGCTGCCGGGGCGGGGGGAAGCGTTCATTGCCCTGGTTGCCGGAATCAGCCTTGCGGCGGTGATGCTGGGCGTTGCGGCGCTGGTCATCGTCATGAGCGTGATGAACGGCTTTCGCGCGGAACTGCTCGACAAGATCGTGGGGCTGAACGGCCATGCGATCATTCAGGCCTATGGCGGGCGGCTGGACGACTGGCAGGACATCCTGAAGCAGGTGCGCGCGACGCCGGGCGTCACTCGCGCCTCGCCGCTGATCGAACAGCCCCTGCTGGCGACGTTCAATGGCCGGGTCGAGGCGATCCTGGTGCGCGGTAACACCGCCGAGGACATCAAGCGGCTGGAGGAAAAGCGCGTGGCTGGCTCGTTCGCCGCGCTCACGCCCGGTTCGTCCAACGTGGCGATCGGATCGCGGCTGGCGGAGAACCTGGGCGCGCGGGTGGGCGATACCATCACCGTGGTCAACCCGGCGGGCCGTTCCACGCCGTTCGGCACCGTGCCCCGCCAGATCGCCTACACCGTTTCCGCGATCTTCGAGATCGGCGTCTATGACTATGACCAGGCCTATGTCGTGATGCCGATCCCCGATGCGCAGACGCTGCTGCTGACGGGCGACACGATCGGGATGATCGAAGTGACGACGACCAATGCCGATACCGTCAACCAGACGCTCGCGCCGCTCAAGCAGCAGCTGGCCGGGCGGGCCGTGGTGACGGACTGGATGACCATCAACGGCAGCCTGTTCAAGGCGCTGGCGGTGGAGCGCGTGACGATGTTCGTGGTGCTCTCTATCATCGTGCTGGTGGCGGTGTTCAACATCCTTTCGTCGCTGATCATGCTGGTGCGCGCCAAGACGCGCGACATCGCGATCCTGCGCACGATGGGGGCGACACGGCGCAGCCTGCTCAAGATATTCATGACCATCGGCTTCGTGATCGGGGCGCTCGGCACCATGGTCGGGCTGGGGCTGGGCTTCGTGTTCCTCTATTTCCGCCAATCGGTGGTCCACGCTGTCGAATGGATCACGGGGCAGAACCTGTGGGACCCCTCGATCCGCTTTCTGACGGAATTGCCCAGCCGCAGCGATCCGGTCGAAATCGTGGTGATCTGCGTGATGGCGCTCGTGCTAAGCTTCCTGGCGACGCTCTATCCGGCGATGAAGGCGGCCAGTACCGATCCCGTGCAGGTGCTGCGCTATGAATGA
PROTEIN sequence
Length: 414
LILNTFEWTIAKRYMLPGRGEAFIALVAGISLAAVMLGVAALVIVMSVMNGFRAELLDKIVGLNGHAIIQAYGGRLDDWQDILKQVRATPGVTRASPLIEQPLLATFNGRVEAILVRGNTAEDIKRLEEKRVAGSFAALTPGSSNVAIGSRLAENLGARVGDTITVVNPAGRSTPFGTVPRQIAYTVSAIFEIGVYDYDQAYVVMPIPDAQTLLLTGDTIGMIEVTTTNADTVNQTLAPLKQQLAGRAVVTDWMTINGSLFKALAVERVTMFVVLSIIVLVAVFNILSSLIMLVRAKTRDIAILRTMGATRRSLLKIFMTIGFVIGALGTMVGLGLGFVFLYFRQSVVHAVEWITGQNLWDPSIRFLTELPSRSDPVEIVVICVMALVLSFLATLYPAMKAASTDPVQVLRYE*