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2019_SCN_bioreactor_t3_biofilm_scaffold_21604_5

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(3631..4041)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B562C5 similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 136.0
  • Bit_score: 240
  • Evalue 7.60e-61
Isopropylmalate/homocitrate/citramalate synthases {ECO:0000313|EMBL:GAO56358.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 136.0
  • Bit_score: 268
  • Evalue 2.80e-69
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 135.0
  • Bit_score: 211
  • Evalue 1.10e-52

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 411
ATGAGCCGTGCCGCAACGCTTGCCCTTCTCAAAACCTACTATGGCGCGTTCAACGCCGGGAACTGGGAGGGGATGCTGGCGTGCCTGTCCGACGACGTGGCGCACGACATCAACCAGGGCGAACGGCAGGTGGGCAAGGACACGTTCCGCGCCTTCATCGCCCATATGGAACGCTGCTATCGCGAGCGGCTGGAAGACATCGTGTTGATGGCCAACGACGATGGCACGCGCGCGGCGGCCGAATTCGTGGTGCACGGGGAATACCTGACAACCGACGAAGGGCTGCCCGAAGCGAACGGCCAGACTTATGTCCTGCCGGCGGGCGCGTTCCTGTCCATCGCCGATGGCCGGATCACGCGCTTGACGATGTATTACAATCTGGCCGACTGGACGGCGCAAGTGGTCGGCTGA
PROTEIN sequence
Length: 137
MSRAATLALLKTYYGAFNAGNWEGMLACLSDDVAHDINQGERQVGKDTFRAFIAHMERCYRERLEDIVLMANDDGTRAAAEFVVHGEYLTTDEGLPEANGQTYVLPAGAFLSIADGRITRLTMYYNLADWTAQVVG*