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2019_SCN_bioreactor_t3_biofilm_scaffold_42822_1

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(1..183)

Top 3 Functional Annotations

Value Algorithm Source
UDP-glucose 4-epimerase {ECO:0000313|EMBL:GAO56965.1}; EC=5.1.3.2 {ECO:0000313|EMBL:GAO56965.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 61.0
  • Bit_score: 119
  • Evalue 1.60e-24
NAD-dependent epimerase/dehydratase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G981_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 61.0
  • Bit_score: 105
  • Evalue 1.30e-20
NAD-dependent epimerase/dehydratase similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 61.0
  • Bit_score: 105
  • Evalue 3.70e-21

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 183
ATGGCGGGTGAATTGCTGGCAATCACCGGAGCCACGGGCTTCGTCGGACAGGCCGTGCTGGACCATGCCGCGCGCGCCGGGCTGGAAGTGCGCGCGCTTGCCCGCCGCCCGCAGGAACCGCGCGCCGGGGTCGAGTGGGTGCAGGGCGATCTGGGAGACAAGGCCGCGCTGCGCCGGCTCGTC
PROTEIN sequence
Length: 61
MAGELLAITGATGFVGQAVLDHAARAGLEVRALARRPQEPRAGVEWVQGDLGDKAALRRLV