ggKbase home page

2019_SCN_bioreactor_t3_biofilm_scaffold_42822_4

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(2778..3560)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G984_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 248.0
  • Bit_score: 328
  • Evalue 5.30e-87
Uncharacterized protein {ECO:0000313|EMBL:GAO56968.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 248.0
  • Bit_score: 493
  • Evalue 1.30e-136
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 248.0
  • Bit_score: 328
  • Evalue 1.50e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGGTCGCGCGCTTCGGGCTCTTCGGGGGAGTACAGATGTTCCGTTTTTCGCGCCTTTCGGGGCCAGCTATCGTTACCGGCGGCACGGTTGCCGTTCTGACCGTCGCACTCGCGTCCTGCGCGCCCAAGGTCGTCCCGCCGCCGCCTCCTCCGCCCCCGCCGCCGAAGGTGGTCATCATTCCGCCCAAGCCGATGCCGCCCTACGGCGCCAGCAACAACCTTGCTTTCCCGGCCGCCGATGCCAACGGGCTGCGCGAATCCGTCAACCGCAACATCTCGCCGTCGCAGATGCTGTGGAACCTGCGTTCGGCCTACAATGTCGCCGCGCTCAACTGCAACGCGCCCAAGCACGCCAACATCCTGGTGCGCTATCGCGCGTTCCTGAAGAACCATGCGAGCACGCTCACGGCCGCGAACAAGAAGGTCGATGAGGAATTCCGCAAGAAGTACGGCGCGCGCTTCACCGCTCCGCGCGAACAGTACATGACGGCGGTTTACAACCACTTCGCGCTGCCGCCCACGCTGCCCCATTTCTGCGATGCCGTGCTGGCCGTCAGCGAGGATGGCGAAGCCGTGAAGTCGGCCGATCTGGAAGCCTTCGCGGTGCGCAGCCTGCCGAACATCGAAGTGGTGTTCGATGATTTCTACCGCCGCTACGAACAGTACCGCATCGATCTGGCCGCATGGCAGGCGCAATACGGCCAGCCCGTGGCCCAGCCGGCCTCGGCCGTGGTGCTTCCGGCCACTGCGGGCGGCGGAACGGGCACCTCGCCAAAAAAGTGA
PROTEIN sequence
Length: 261
MVARFGLFGGVQMFRFSRLSGPAIVTGGTVAVLTVALASCAPKVVPPPPPPPPPPKVVIIPPKPMPPYGASNNLAFPAADANGLRESVNRNISPSQMLWNLRSAYNVAALNCNAPKHANILVRYRAFLKNHASTLTAANKKVDEEFRKKYGARFTAPREQYMTAVYNHFALPPTLPHFCDAVLAVSEDGEAVKSADLEAFAVRSLPNIEVVFDDFYRRYEQYRIDLAAWQAQYGQPVAQPASAVVLPATAGGGTGTSPKK*