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2019_SCN_bioreactor_t3_biofilm_scaffold_47867_2

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(296..2572)

Top 3 Functional Annotations

Value Algorithm Source
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:GAO54009.1}; EC=2.1.1.13 {ECO:0000313|EMBL:GAO54009.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 763.0
  • Bit_score: 1509
  • Evalue 0.0
methionine synthase (B12-dependent) (EC:2.1.1.13) similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 764.0
  • Bit_score: 1367
  • Evalue 0.0
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B33EAE similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 758.0
  • Bit_score: 1377
  • Evalue 0.0

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2277
GAAGGCGAGGAAGCCTTCCTTGCCCACGCGCGCAAATGCATGGATTATGGCGCTGCCGTGGTCGTGATGGCGTTCGATGAAAAGGGCCAGGCCGACACCAAGGAGCGCAAGGTCGAAATCTGCTGCCGTGCCTACAAGCTGCTGACGGGCATCGGTTTCCCGCCCGAAGACATCGTGTTCGATCCCAACGTCTTCGCCGTCGCCACCGGCATCGAGGAGCACGACCGCTACGCGCTCGATTTCATCGAGGCCACGCGCGAGATCAAGGCGGCCTGCCCGCACGTCCACATCTCCGGCGGCCTGTCCAACCTCTCGTTCTCGTTCCGCGGCAACGAGACGGTGCGGCGCGCGATGCATTCGGTATTCCTCTACCACGCCATCCCGGCGGGCATGGACATGGCGATCGTCAACGCCGGCCAGCTTGACATCTACGACCAGATCGATCCCGTGCTGCGCGAAGCCTGCGAGGACGTGCTGCTGATGCGCCGGGCCGACGCGACCGAACGGCTGATCGACCTCGCCGAAAGCTACAAGGGGCAGGACAAGGCGGCCGAGAAGGCGGCCGAGGAATGGCGCGGCTGGGATGTCGTGCGCCGGCTGGAACACGCGCTGGTCAAGGGCATAGACGCCCATATCGTCGACGATACCGAGGAGGCGCGCCAGCAGATCGCCGCCCGCAACGGTCGCCCGATCGAGGTGATCGAAGGCCCGCTGATGGAAGGCATGAACACCGTTGGCGACCTGTTCGGATCGGGCAAGATGTTCCTACCGCAGGTGGTCAAGTCCGCGCGCGTGATGAAGAAGGCGGTGGCGCACCTGATCCCGTTCATCGAGGCGGAGAAGGAAGCCGGGTCCAAGGCCAAGGGCCGCATCGTGATGGCCACGGTGAAGGGCGATGTGCACGATATCGGCAAGAACATCGTCGGCGTGGTGCTCCAGTGCAACGGCTACGAGGTGATCGACCTGGGCGTGATGGTGCCGTGGGCGTCGATCCTGCAGGCCGCCAATGAGAACGAGGCAGACATCATCGGTCTGTCGGGCCTGATCACCCCCTCGCTTGACGAGATGGTGACCGTGGCCGAGGAAATGCAGCGCGCCGGCATGACCATTCCGCTGCTGATCGGCGGGGCCACGACCAGCAAGGTCCACACCGCGCTGCGCATCGATCCGGCCTATGACGGCCCGGTGGTCCACGTGCTCGACGCCAGCCGCGCGGTGGGCGTTGCCTCGCAACTCCTGTCGGACACGCAGCACGATGGCTTCGTCAAGGCGACGGCCGCCGATTACCAGCACGTGCGCGATGCCCGCGCGGGCAAGGGCGCATCGAAGCTGTTGCCGCTGGCCGATGCGCGCGACAACGCCTTCGCGCCCGATTTCTCGGAAAAGGCGCCGCCGCCCGAACAGCCCGGCCTGCACGTCTTCCCCGAATGGGATCTCGCCGATCTGGTCGACTGTTTCGACTGGACGCCGTTCTTCCGCGCCTGGGAACTCGCGGGCACCTATCCCGCGATCCTCGACGACGCGGTGGTGGGCGAAAGCGCGCGCAATCTCTATGCCGATGCCCGCGCGATGCTCGAAACCATCGTCGCCGAAAAGTGGCTGACGGCCAAGGCTGTCGCCGGGTTCTGGCCTTGCGCCCGCCACGGCGACGACGTGGTGCTGCATCCCGATGACGACGAACGGTCGGTGCACCTGCCGTTCCTGCGCCAGCAATTCATCAAGAGCCGGGGCCGGGCCAATTTCTGTCTGGCCGATTTCATCGATCCGGCGGGGGACTGGATCGGCGGCTTCGCCGTCGGCATCCACGGCATCGAACCGCATCTGGAGCGTTTCAAGGCCGCGCACGACGATTATTCGGACATCCTGCTGAAAGCGCTGGCCGATCGCTTCGCCGAAGCCTTCGCCGAACGCCTGCACCAGCACGTGCGCACGACGCTGTGGGCCTATGCGCCGGGCGAACAGCTCACCAACGAGGCGCTGATCCGCGAGCAGTACCGCGGCATCCGTCCCGCGCCCGGCTATCCGGCCTGCCCGGATCACAGCCTGAAGCCGATCCTGTTCGATCTGCTGGGCGCGCAGGAGAACGCCGGGATCGTGCTGACGGAGAGCCAGGCGATGCTGCCCACGGCGGCGGTCTCGGGCTTCTATTTCGCCCACCCGGAAAGCCAGTACTTCGGCGTTGCCACCATCGGGCGCGACCAGCTTGAGGATTACGCCGGCCGGCGTGGGATGGACCTGGCCACGGCGGAGCGCTGGCTGCGGCCGAATCTGGACTAG
PROTEIN sequence
Length: 759
EGEEAFLAHARKCMDYGAAVVVMAFDEKGQADTKERKVEICCRAYKLLTGIGFPPEDIVFDPNVFAVATGIEEHDRYALDFIEATREIKAACPHVHISGGLSNLSFSFRGNETVRRAMHSVFLYHAIPAGMDMAIVNAGQLDIYDQIDPVLREACEDVLLMRRADATERLIDLAESYKGQDKAAEKAAEEWRGWDVVRRLEHALVKGIDAHIVDDTEEARQQIAARNGRPIEVIEGPLMEGMNTVGDLFGSGKMFLPQVVKSARVMKKAVAHLIPFIEAEKEAGSKAKGRIVMATVKGDVHDIGKNIVGVVLQCNGYEVIDLGVMVPWASILQAANENEADIIGLSGLITPSLDEMVTVAEEMQRAGMTIPLLIGGATTSKVHTALRIDPAYDGPVVHVLDASRAVGVASQLLSDTQHDGFVKATAADYQHVRDARAGKGASKLLPLADARDNAFAPDFSEKAPPPEQPGLHVFPEWDLADLVDCFDWTPFFRAWELAGTYPAILDDAVVGESARNLYADARAMLETIVAEKWLTAKAVAGFWPCARHGDDVVLHPDDDERSVHLPFLRQQFIKSRGRANFCLADFIDPAGDWIGGFAVGIHGIEPHLERFKAAHDDYSDILLKALADRFAEAFAERLHQHVRTTLWAYAPGEQLTNEALIREQYRGIRPAPGYPACPDHSLKPILFDLLGAQENAGIVLTESQAMLPTAAVSGFYFAHPESQYFGVATIGRDQLEDYAGRRGMDLATAERWLRPNLD*