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2019_SCN_bioreactor_t3_biofilm_scaffold_51027_6

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 5604..6107

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002899EA6 similarity UNIREF
DB: UNIREF100
  • Identity: 36.3
  • Coverage: 190.0
  • Bit_score: 106
  • Evalue 2.10e-20
Opacity protein antigens-like protein {ECO:0000313|EMBL:KHS42041.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.1
  • Coverage: 171.0
  • Bit_score: 122
  • Evalue 4.00e-25
putative outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 181.0
  • Bit_score: 104
  • Evalue 3.00e-20

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGAAGTCTATCGCACGCGTCGCTGCACTGGCAGCGGCGTCCATCACTACTGCTGCTCATGCCGGAGACATTTCCGGACCGCGCGGGGAACTGCTGGTCGGTTACGATCACGTTTCGATGGGCTTTGATGAGGATAGCGCCAATGCCAACGGTGTCGCATTTGGCGGTGGCATTGGCTACGATATCGCGCTGGCATCGCGATTTTCGGTCGGCGTGGATGGAGAAATCACGGGCTCCTCGTCCAAGTACACCGAGTCCAACCCACTCTATTCCCTTGGCATCAAGTACGGTCGCGATCTGTATGCCGGAGGCCGTGTCACCTTCCAGGCCAGCAAGAACGTCAATCTTTACGCCAAGGTCGGTTACACGAACACCCGCGTAAAATTCACCGGAGACGATGCAATCGAACATTTCGAACGCAGCGAAAACTACAACGGCGTTCGTGCTGGCGTCGGCGCCCAGGTCCGTGTATCCGGCCCGCTCGACGGCGCGCTGGAATACCGC
PROTEIN sequence
Length: 168
MKSIARVAALAAASITTAAHAGDISGPRGELLVGYDHVSMGFDEDSANANGVAFGGGIGYDIALASRFSVGVDGEITGSSSKYTESNPLYSLGIKYGRDLYAGGRVTFQASKNVNLYAKVGYTNTRVKFTGDDAIEHFERSENYNGVRAGVGAQVRVSGPLDGALEYR