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2019_SCN_bioreactor_t3_biofilm_scaffold_57493_28

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(31397..32326)

Top 3 Functional Annotations

Value Algorithm Source
Catechol 1,2-dioxygenase {ECO:0000313|EMBL:GAO53178.1}; EC=1.13.11.1 {ECO:0000313|EMBL:GAO53178.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 309.0
  • Bit_score: 611
  • Evalue 5.20e-172
Catechol 1,2-dioxygenase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V4X8_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 309.0
  • Bit_score: 511
  • Evalue 3.10e-142
catechol 1,2-dioxygenase similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 309.0
  • Bit_score: 511
  • Evalue 8.70e-143

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGGCATCACAACTCGTGCAGGAATCCGGCGTGCAGAGCTATCTCGACCGCATTGCCGGCGTGGACGAAGCTGGCGGTGACGTGCGCACCAAGGCGATCGTGCGGCGTATCGTGTCAGACCTGTTCACCACCATCGACGATTTCGACGTGACGGCCGAGGAATTCTGGCATGCGCTGCATTTCCTGCAGGAAGCCGCGCCGGAATTCGGGCTGATCGCGCCGGGTCTCGGCTTCGATCACTTCCTCGACATCCGGATGGACCGCGCCGACAAGGCCGCCGGCATCGCGGGCGGCACCCCGCGCACGATCGAAGGCCCGCTCTACGTTCCCGGCGCGCCGCTGGCCAAGAGCTTCGCGCGGCTGGACGATGGCACCGACACGGGCGAGACGCTGATCATGCACGGGCGCGTGTTCGATCTCGATGGCAAGCCTGTGGCCGGCGCGATCGTCGATGTCTGGCATGCCAACACCAAGGGCGGCTATTCGGTGTTCGATCCCTCGCAGACGGCCTACAACAACCGCCGCCGCATCGAGACCGGCGCCGATGGCAGCTACAAGTTCCGCAGCATCGTGCCATCGGGCTATTCGGTTCCGCCGCAGGGCGGCACGGATCGCCTGCTTTCGGCGATCGGTCGCCATGGCAACCGTCCGGCGCATATCCATTTCTTCGTGTCCGCGCCGGGCCATCGCCATCTGACCACGCAGATCAACATCAACGGCGATCCCTATCTGCACGACGATTTCGCCTTCGCCACGCACGATGATCTCATCCCCGAGATCGTGCGCCGCGAGGAACCGGAAGCGATCCATGCCGAGAACCTCAACGGCCCGTTCAGTGAAATCGCTTTCGATTTCGTGCTGCACCCGGCCGCCGATACCGCCGAAACCGAACTCATGGCCCGCCATCGCGCGCCGGCGGTAGCGGCCTGA
PROTEIN sequence
Length: 310
MASQLVQESGVQSYLDRIAGVDEAGGDVRTKAIVRRIVSDLFTTIDDFDVTAEEFWHALHFLQEAAPEFGLIAPGLGFDHFLDIRMDRADKAAGIAGGTPRTIEGPLYVPGAPLAKSFARLDDGTDTGETLIMHGRVFDLDGKPVAGAIVDVWHANTKGGYSVFDPSQTAYNNRRRIETGADGSYKFRSIVPSGYSVPPQGGTDRLLSAIGRHGNRPAHIHFFVSAPGHRHLTTQININGDPYLHDDFAFATHDDLIPEIVRREEPEAIHAENLNGPFSEIAFDFVLHPAADTAETELMARHRAPAVAA*