ggKbase home page

2019_SCN_bioreactor_t3_biofilm_scaffold_83778_21

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(18146..18793)

Top 3 Functional Annotations

Value Algorithm Source
Glycosidase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C9V3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 210.0
  • Bit_score: 327
  • Evalue 5.70e-87
Uncharacterized protein {ECO:0000313|EMBL:GAO56832.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 210.0
  • Bit_score: 427
  • Evalue 9.70e-117
glycosidase, PH1107-related similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 210.0
  • Bit_score: 315
  • Evalue 1.10e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
TTGCGCTGTGGCCCCCTGCGCCTGGTGCGGTTCGAGGATGATGACGGAAAAGCCGAATGGATCGGCACCTACACCGCCTATTCCGGCCAGTCGATCCGGTCCGAATTGCTGAGGACGAGCGACTTCAAGACCTTCTCGCTGGAACCGGTGGAAGGGCGCGCGGGGCGCAACAAGGGCATGGCCCTGTTCCCGCGGCGGATCGATGGACAGTACATGATGATCGGCCGCCAGGACGGCAAGAATCTCTATCTGCTGCGTTCACCCCAACTGGATCAGTGGGATGATGACGGCGTGCTGCTGATGGAGCCGCGCTTCGCCTGGGAATTCATCCAGATCGGCAATTGCGGAAGCCCGGTGCTGACCAAGGCGGGGTGGTTGGTGCTGACCCACGGTGTTGGCCCCATGCGCAAATATGCGCTGGGTGCGGTGCTGCTGGACAGCGCCGATCCATCGAAGGTGCTCGCGCGAACGCCCGAGCCGGTCCTGACCGCCGAAAATTCAGACCGGGCGGGCTATGTTCCCAATGTGGTCTATACGTGCGGCATGATGCCGGTGGGAGAGCATCTTCTCATCCCTTACGGGATATCGGACAGCGTGGTTGGCTTCGCGACCATCGCTATCGACGATATTCTGGCCACGATGGCCTGA
PROTEIN sequence
Length: 216
LRCGPLRLVRFEDDDGKAEWIGTYTAYSGQSIRSELLRTSDFKTFSLEPVEGRAGRNKGMALFPRRIDGQYMMIGRQDGKNLYLLRSPQLDQWDDDGVLLMEPRFAWEFIQIGNCGSPVLTKAGWLVLTHGVGPMRKYALGAVLLDSADPSKVLARTPEPVLTAENSDRAGYVPNVVYTCGMMPVGEHLLIPYGISDSVVGFATIAIDDILATMA*