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2019_SCN_bioreactor_t3_biofilm_scaffold_123995_1

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(41..781)

Top 3 Functional Annotations

Value Algorithm Source
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; EC=3.1.4.17 {ECO:0000256|HAMAP-Rule:MF_00905};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 246.0
  • Bit_score: 503
  • Evalue 1.60e-139
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBM7_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 238.0
  • Bit_score: 396
  • Evalue 2.00e-107
metallophosphoesterase similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 238.0
  • Bit_score: 396
  • Evalue 5.50e-108

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
TTGGTCGATCGTGGCGACCGGGAAAGCTACGAACGGCTGCGCGAGGCGTTGTCCGGGCTGCCGTTTCCGGTGCATTTCGCGCTGGGCAACCATGACGAGCGCGCGACGTTTCGCGAGGTCTTTCCCCAAGCGCCGTTCACCGGGGAATATCTGCAATACGTGGTCGACAGCCCGGCGCTGCGGCTGATCGTGCTCGATACGCTGGAAGAAGGGCGGCACGGCGGCGCGTTCTGCGAGGAGCGCGCGGCATGGCTTGGCGCGCGGCTGGACGAGGACACGGCCAAGCCCACGCTGATCGTCCAGCACCATCCCCCGATCGAGGCCGGCATTCCGTGGATGAACACCGACGCCGCCGAACCCTGGGTGGAGCGGCTGGCGTCCTGCCTGCGCGGGCGCGACAACGTGACAGGGCTGGTCTGTGGTCACATCCATCGCGCCAGCGCGACGCGGTGGGAGCATGTGATCGTCGCTACCTGCCCGTCCACCGCGCCGCAGGTCGCGCTCGACTTGCGGCCGATCGATCCCGACGTGCCCGATCAGCGCAACCTGATCGTCGCCGATCCGCCGGCCTATGCGCTGCACTGGTGGAACGGCCGCGAACTGGTGACGCACTGGGATACGGCCGAGGATCGGCTGGTGCTGGCGCGCTATGACGCCAATCTCCAGCAGATGATCCAGCACATGCTGGCCGAGCGCCCCGACGCCGGTCTGGCGGGAGCGGGGATGGCGGCGGCGGAATAG
PROTEIN sequence
Length: 247
LVDRGDRESYERLREALSGLPFPVHFALGNHDERATFREVFPQAPFTGEYLQYVVDSPALRLIVLDTLEEGRHGGAFCEERAAWLGARLDEDTAKPTLIVQHHPPIEAGIPWMNTDAAEPWVERLASCLRGRDNVTGLVCGHIHRASATRWEHVIVATCPSTAPQVALDLRPIDPDVPDQRNLIVADPPAYALHWWNGRELVTHWDTAEDRLVLARYDANLQQMIQHMLAERPDAGLAGAGMAAAE*