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2019_SCN_bioreactor_t3_biofilm_scaffold_128840_7

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 9097..10101

Top 3 Functional Annotations

Value Algorithm Source
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:GAO53296.1}; EC=1.1.1.95 {ECO:0000313|EMBL:GAO53296.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 334.0
  • Bit_score: 627
  • Evalue 5.80e-177
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Pseudomonas sp. Ag1 RepID=J0PBT2_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 332.0
  • Bit_score: 442
  • Evalue 3.20e-121
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 332.0
  • Bit_score: 440
  • Evalue 2.70e-121

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGCCCTCGTCCAGCCGCCGCGTCGTCGTCACGCAACGCTTCTTCGATCAGGCGACGATCGACTATCTTGAACAGGCCGGCTGCGAGGTGGTGCAGGCCGAACTGCCGCCGGGGCAGGCCGACGGCAACCTGAGCCACGACGAACTGGTCGGGCACCTGGTGGGCGCGGCCGGATGGATCGTGGGCCATGCGCGCGTGACGCGCGAACTGATGGCCGCGCTGCCCGATCTCCGGATCGTTTCGCGCCGGGGCGTCGGCTATGATCGCGTCGATCTGGCGGCGGCCGGGGATCTTGGCAAGGTCGTGTGCATCGCGGTGGGCGGCAACCACGAATCCGTGGCGGACCATACGCTCGCGCTGATGCTCGCGGTCGGGCATCGCTTCCGCGAAACGCAGGCGAAAATGATCGGTGGCGACTGGTCGATCCTGCTGGGGACCGACCTTTACCGCAAGACCGTGGGCGTGATCGGACCGGGCCGGATCGGACGAAGCGTGGTGCAGCGTCTGGCCGGCTTCGAAGCGGAGGTCCTGGCCTATGGCGGTTCGCCGGATGCCGACTATGCGGCCCGCTCCGGCGTGGCCTGGGTTGACCTGGACGAACTGCTGACGCGCAGCGACTATGTGACGCTCCACGCGCCGCTGACGCCCGAGACGCGTTTCATCATCGATGCCGATGCGCTGGCCCGGATGAAGCCCGGGGCGTTCCTGATCAACACGGCCCGGGGCGGACTGGTCGACGATGCCGCGCTGCTCGATGCGCTGCGGAGCGGGGCGATCGCCGGCGCGGGGCTCGATGTGTTCCTCAGCGAAGCCGACCCCGCGCTCAAGCCGGTCACGCAGGCGCTGCTCGAAATGCCCAACGTGATCGCCACGCCCCATTCGGGCGCCTCTTCGCGCGAGGGGTTGGACCGGACCAACATGGTGGCCGCCCGCTGCGTCGTCGCCGTGCTCGACGGCGGCGATCCGCCGGCCGAATGCGTCGTTGCCGATGGGCGGAAGGGCTGA
PROTEIN sequence
Length: 335
MPSSSRRVVVTQRFFDQATIDYLEQAGCEVVQAELPPGQADGNLSHDELVGHLVGAAGWIVGHARVTRELMAALPDLRIVSRRGVGYDRVDLAAAGDLGKVVCIAVGGNHESVADHTLALMLAVGHRFRETQAKMIGGDWSILLGTDLYRKTVGVIGPGRIGRSVVQRLAGFEAEVLAYGGSPDADYAARSGVAWVDLDELLTRSDYVTLHAPLTPETRFIIDADALARMKPGAFLINTARGGLVDDAALLDALRSGAIAGAGLDVFLSEADPALKPVTQALLEMPNVIATPHSGASSREGLDRTNMVAARCVVAVLDGGDPPAECVVADGRKG*