ggKbase home page

2019_SCN_bioreactor_t3_biofilm_scaffold_150602_1

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 3..1958

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ24 RepID=UPI000361C600 similarity UNIREF
DB: UNIREF100
  • Identity: 26.3
  • Coverage: 582.0
  • Bit_score: 115
  • Evalue 1.00e-22
tetratricopeptide repeat protein, O-GlcNAc transferase-like protein similarity KEGG
DB: KEGG
  • Identity: 28.6
  • Coverage: 364.0
  • Bit_score: 101
  • Evalue 5.70e-19
Tax=GWF1_Sphingomonadales_63_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 300.0
  • Bit_score: 457
  • Evalue 2.70e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF1_Sphingomonadales_63_6_curated → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1956
CTCGTCGATGAAGCCTGCCGATTTGAGCCCACCAAGCGTGCCGACTATCACTGGGCCTTCGACGCCATTTTGATGGGGCAGCCCGAGACGGTCCGCGCACGTATCCTTGCGCAAACGCCCGCTGATTTCCTCCAGTCGCTGCGTCAGGACGGTTTGCCGGCGGAAGTCGCGCCAAGCTTGATCGAAGCGGAATTCGACGAGAGCCACGGCGATGCCGCTGTCGACAGACTTCTTCGCGAGGCACACGATGCGCTCGAGAGCGACGATACCGACCGGGCGAAAGCTTTGCTCGCTGATGCCGCCGCTATCTCCCCATCAAACCCGATGCCATTCATACAGTTGGCGTTCACGCATCTTCAACTCCACGAACATGAGGAATCCGTTCTGGCGGCCGAGCGCGTCGTGGAACAAGAACCGGACAATCCCGGCACACATTCGATGTACGGGCTGATGCTGTCGTTAGCCGACCAGACCGAGGAAGCCGAGGCGGCATTTAATCGCGCGTTGGAAATCGACCCCGGCTGCGCGCCGGCGATCCTTCATCTGGCGCGTTTGCGCGATCGGAATGATGATGAAGATGGTGCGCTCTATTTGTATCGCAGGGCGGCTGCGCTCGGCGAGTTGACAGATGACGCGACCGCGCACTTTGCCAGAATCCTGATGCGTCAGGACAAGGAGGATGAAGCCGAGGCAGTGCTTCGTCAAGCGCTCGAGGATCATTCTGATCGTTCCGAAGCCAGGCACCTCTTGGCCAGCTTGCTGAGCGGAACCGGTCGTGCGCCAGAGGCGATAATGCTGCTCCGGGATGTGGCCGAGCACGGCGACGATTGGATGGCCTGGGCCGATCTCGGCGCCTTTCTCTCAGCCGAGGGAGAATTTGCCGAGGCCCGCGCTGCACTAGATCGGAGCATTGCGACCGGCGCCGATAGCCCTGTGATCTACCGGATGTTGGCCACTGCCATGCGCAATTTGGGCGAACCTTTCGAAGCGATTGCCAAGTTAGTCGACGCCATGCTGGAAAAGCATGCCGACGATGCCTGGGCATGGATTGCGGCCGGAGATATCTATAGCGCGAGCCGTCAGCGAGATCGCGCCGAGAAGGCCTATCGCCACGCCACGACCATCGAGGATGGCGAGCCGGCCTGGGTCAGGCTGGCGCGCCTGCTGATGGAGAAATCGGCTTCGGATGCCGAGGCGGAGTCGGCACTGCGGAAGGCCGTCGAGGCAGTTCTTGAAAGCGGTGCATGCGGTCCGATGCGCGAAGTTGCCGAGCTACTCGTCCATCATGGCGACGATGACGACGCGCTCGAATTGCTGAACGGGGCACTTGCCGCAAATGAAGACTGCTATTGCAGCCTTGTACTCCAGGGGGACATCGCGGCCCGTCGGCATAACGAGGATGGTGCGCGCGAACATTTCGAAGCCGCCCTCGCCCTGAATGACATTGGCGTATCGGCGCTGACGGGACTCGCTCGTATCTCTGCGCCTTCCGAAGCGCAGGCATTGATTGGCCGGGCGATGGAGGCTGACCCCGACAATCCCAAATGCCTTTTGGCGCGTGCGCAGTTGACCGATCGCGAACTGCAGTCCCGGATCGAGGACGGCTCCGAAGCGCTCAAACGCGACCCGGATCTGACCGAGGCACGGCTATTTCTCGCGCCGCTCGAAGCCAAGCGTGGCGATATCCAGGCGGCGATCGCCCATCTCGGTGCCGCACTGCCGGAATTGGAGACGCGCCGTGAGCTCATTCCGAGCTTTGTCGACACAAGCCTGGAGCTTGCCCGTGCTGGCCTTAGTAATGAGTTGAGCGCACTGCTCGACTCCGAAGAAGGCCGGACAGTGGAGCCGCTCTCGATAGCGTTGAAGCTGGACCGAGGAGAAACGCCAGCTGTTGCCAAGGAAATTCGGGAAGTTGCGCTTGATATTCTGGATCAGCTTCACGCCAACGAACGATAG
PROTEIN sequence
Length: 652
LVDEACRFEPTKRADYHWAFDAILMGQPETVRARILAQTPADFLQSLRQDGLPAEVAPSLIEAEFDESHGDAAVDRLLREAHDALESDDTDRAKALLADAAAISPSNPMPFIQLAFTHLQLHEHEESVLAAERVVEQEPDNPGTHSMYGLMLSLADQTEEAEAAFNRALEIDPGCAPAILHLARLRDRNDDEDGALYLYRRAAALGELTDDATAHFARILMRQDKEDEAEAVLRQALEDHSDRSEARHLLASLLSGTGRAPEAIMLLRDVAEHGDDWMAWADLGAFLSAEGEFAEARAALDRSIATGADSPVIYRMLATAMRNLGEPFEAIAKLVDAMLEKHADDAWAWIAAGDIYSASRQRDRAEKAYRHATTIEDGEPAWVRLARLLMEKSASDAEAESALRKAVEAVLESGACGPMREVAELLVHHGDDDDALELLNGALAANEDCYCSLVLQGDIAARRHNEDGAREHFEAALALNDIGVSALTGLARISAPSEAQALIGRAMEADPDNPKCLLARAQLTDRELQSRIEDGSEALKRDPDLTEARLFLAPLEAKRGDIQAAIAHLGAALPELETRRELIPSFVDTSLELARAGLSNELSALLDSEEGRTVEPLSIALKLDRGETPAVAKEIREVALDILDQLHANER*