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2019_SCN_bioreactor_t3_biofilm_scaffold_136937_5

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 4263..4595

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit yajC n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6L0_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 110.0
  • Bit_score: 183
  • Evalue 6.80e-44
Preprotein translocase subunit yajC {ECO:0000313|EMBL:GAO55919.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 110.0
  • Bit_score: 221
  • Evalue 5.40e-55
protein translocase subunit yajC similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 110.0
  • Bit_score: 183
  • Evalue 1.90e-44

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGATGCTGACATTCCTTTCCGCCGCCGCACCCGCCGCCACCCAGGAGCCGCCGCAGTGGCTTTCGTTCCTGCCGCTGGTCGGCATGGCGTTCATTTTCTGGTTCCTGATCCTGCGGCCGCAGATGCGCCAGCAGAAGGCTCACAAGGAAAAGATCGCCGCGATGAAGAAGGGTGACGTGGTCGTCACCGCCGGGGGCCTTGTCGGCAAGGTCATCAAGCTCGACGATCACTATGCCGAACTGGAGCTTGGCCCCAACGTGCGCGTCAAGGCGGTGCGTTCGACAATCGGTGACATCGTTCCCCCCGGCGGCACCGCGCCGGCCAACGACTGA
PROTEIN sequence
Length: 111
MMLTFLSAAAPAATQEPPQWLSFLPLVGMAFIFWFLILRPQMRQQKAHKEKIAAMKKGDVVVTAGGLVGKVIKLDDHYAELELGPNVRVKAVRSTIGDIVPPGGTAPAND*