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2019_SCN_bioreactor_t3_biofilm_scaffold_136937_7

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 6236..7213

Top 3 Functional Annotations

Value Algorithm Source
preprotein translocase subunit SecF n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B69A1A similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 323.0
  • Bit_score: 574
  • Evalue 4.10e-161
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 325.0
  • Bit_score: 629
  • Evalue 1.90e-177
protein translocase subunit secF similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 323.0
  • Bit_score: 567
  • Evalue 1.80e-159

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGAAGCTCCTCAAGCTCATTCCCGACAATACCAACATCCACTTCCTGAAGTGGCGGCTGCCGTTCTACATCGCCAGCCTTCTGTTGATGGCGGGATCGCTTACGCTGGTGGCGACGCGCGGCCTCAACCTGGGCGTCGATTTCGTCGGTGGCCAGATGATCCGCGTGACCTTCGAGCGCAGCGCCGAGGCCCCCGTGGCGCAGCTGCGCGGCGAGGTGGACAAGCTCGGCTATGGCGAGCCGATCATCCAGCGCTACGGCAAGCCCAACGAAATCTCGATCCGGATGAAGCTGCCCGAAGGATCGGACCACGATCCCGCGCTGTCGGACAAGATGGCCCGCACGATCACCGCCGCGATCAAGGCGGCCCATGCCGATGCGCGGATCGACGGCGTCGATTCGGTTTCGGGCAAGGTTTCCAAGGAACTGGGCTGGGATGCGTTCAAGGCGCTGGGCTTTGCCGCGCTGGCCGTGGCGGCCTACATCTGGATACGGTTCGAATGGCAGTTCGGCATCGGCGCGCTGTTCGCGCTGGTGCACGACGTGGTGCTGACGCTGGGCATGTTCGCGATCACGCAGATGGAGTTCGACCTCAACATCGTGGCCGCGCTGCTGACGCTGATCGGCTATTCGCTCAACGATACGATCGTGGTCTATGACCGTATCCGCGAGAACATGAAGAAATACCGCAAGATGCCGATGCCGGAGCTGCTCGACCTTTCGGTCAACGAGACGCTGGCGCGCACGATCGTGACCTCGCTGTCGATGCTGATCACGCTGGTCGCGCTGCTGCTGTTCGGGCCGGACGTGATCTTCGGCTTCACCGCAGCGATCACGCTGGGCATTTTCGTGGGTACCTACAGCTCGATCTACATGGCCGCGCCGATCCTGATCTGGCTTAAGGTCAATCCCAAGAGCTTCATCCCCACCGAAAGCGCGCTGGAAAAGCAGGAACGCCTGGCGCGCGAGCGGGGGTGA
PROTEIN sequence
Length: 326
MKLLKLIPDNTNIHFLKWRLPFYIASLLLMAGSLTLVATRGLNLGVDFVGGQMIRVTFERSAEAPVAQLRGEVDKLGYGEPIIQRYGKPNEISIRMKLPEGSDHDPALSDKMARTITAAIKAAHADARIDGVDSVSGKVSKELGWDAFKALGFAALAVAAYIWIRFEWQFGIGALFALVHDVVLTLGMFAITQMEFDLNIVAALLTLIGYSLNDTIVVYDRIRENMKKYRKMPMPELLDLSVNETLARTIVTSLSMLITLVALLLFGPDVIFGFTAAITLGIFVGTYSSIYMAAPILIWLKVNPKSFIPTESALEKQERLARERG*