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2019_SCN_bioreactor_t3_biofilm_scaffold_136937_9

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(8604..9176)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6L4_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 190.0
  • Bit_score: 298
  • Evalue 2.50e-78
Uncharacterized protein {ECO:0000313|EMBL:GAO55923.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 190.0
  • Bit_score: 378
  • Evalue 4.60e-102
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 190.0
  • Bit_score: 298
  • Evalue 7.10e-79

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGATCAACCGCATCCGCGACATCCGTCGCCAGAAAGGCCTGACCCTGGCCGACGTGGCCGCGCGCTGCGTTCCGCCGACGACGGCGCAAACCATCGGCCGGCTCGAAACCGGGATGCGCAGCCTGTCGCTGACGTGGATGAACCGGATCGGCGCCGCGCTCGATGTCGATCCACAGCTTCTGGTGAAGCCGGACCATTCCGCCACGCCCAACGTCGTCGCACGGCTCACCGCCGGCGGACCTGAGGCGCTTACGCACCCTATGGACGCGGTGCTGCCCACCGAGTTCGGCGGCGATGCGCGGCTCATGGCGCTGGTGGTCGATGCGGGCCTGGGCGAATACCGGGCGGGCGATCAGGTGTGGCTGCGGCAGGTCGACCCGACGGATTATTCGCGCGCGCTCAACCGCGACGTGCTGGCGCCACGCCCTGCCGGCCGCTTCGCCTTCGGGCGGATGATCGACCATCTCGACGGGCGCATCGCGCTCCTGCCCCCAGGCATCGGGCAGCGGCAGGTGGTGATCGACCACCCGGCGTGGATCGGCGTGGCGGAAATGCTGGTCCGGAAACTGTGA
PROTEIN sequence
Length: 191
MINRIRDIRRQKGLTLADVAARCVPPTTAQTIGRLETGMRSLSLTWMNRIGAALDVDPQLLVKPDHSATPNVVARLTAGGPEALTHPMDAVLPTEFGGDARLMALVVDAGLGEYRAGDQVWLRQVDPTDYSRALNRDVLAPRPAGRFAFGRMIDHLDGRIALLPPGIGQRQVVIDHPAWIGVAEMLVRKL*