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2019_SCN_bioreactor_t3_biofilm_scaffold_148999_1

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 2..727

Top 3 Functional Annotations

Value Algorithm Source
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 240.0
  • Bit_score: 463
  • Evalue 1.40e-127
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55) similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 239.0
  • Bit_score: 395
  • Evalue 7.10e-108
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Novosphingobium sp. AP12 RepID=J3AB09_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 239.0
  • Bit_score: 407
  • Evalue 4.90e-111

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
CTGGCCGCCATTGCCGACAAGCTGGACCTGTTCCTGATTTTCAAGAGCTCCTTCGACAAGGCGAACCGCACTTCGGACCAGTCGTTTCGCGGGCTTGGCATGGACGAAGGGCTGCGCATCCTCGAAAAGGTGCGCGAACGGACCGGGTTGCCCGTCCTGACCGACGTCCACGAAGCCGGGCAGGTTGCGGCCGTGGCGCAGGCGGTGGACGTGCTTCAGACGCCGGCTTTCCTCGCGCGGCAGACCGATTTCATCGCCGCCGTCGCCGCTTCGGGCAAGCCGGTCAATATCAAGAAGGCCCAGTTCATGGCGCCGGGGGACATGCGCCAGGTGGTGGCCAAGGCCCGCAACGCGGCGCGCGCGGCGGGGCACGAGACCGATGCGTTCCTGCTGTGCGACCGCGGCACCTCGTTCGGCTACAACACGCTGGTGTCCGACATGCGTGGCCTCGCCATCATGGCGGAAACCGGCTGCCCGGTGGTGTTCGACGCCACCCATTCGGTCCAGCAGCCCGGCGGCCTTGGCGAACGATCGGGCGGACAGCGCGAATTCGTCCCCCTGCTCGCCCGCGCGGCCGTGGCGGCGGGCATTGCCGGCCTGTTCATGGAAACGCACCCCGATCCGGACCAGGCCCTGTCGGACGGCCCCAACGCCCTGCCGCTCGACGCGTTCGAGCCGCTGATGCGACAGCTGCTGGCGATTGATGGGGTGGTGAAGGGGGGGTAG
PROTEIN sequence
Length: 242
LAAIADKLDLFLIFKSSFDKANRTSDQSFRGLGMDEGLRILEKVRERTGLPVLTDVHEAGQVAAVAQAVDVLQTPAFLARQTDFIAAVAASGKPVNIKKAQFMAPGDMRQVVAKARNAARAAGHETDAFLLCDRGTSFGYNTLVSDMRGLAIMAETGCPVVFDATHSVQQPGGLGERSGGQREFVPLLARAAVAAGIAGLFMETHPDPDQALSDGPNALPLDAFEPLMRQLLAIDGVVKGG*