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2019_SCN_bioreactor_t3_biofilm_scaffold_169355_27

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(32486..33658)

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5D6_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 383.0
  • Bit_score: 530
  • Evalue 1.40e-147
Uncharacterized protein {ECO:0000313|EMBL:GAO53112.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 390.0
  • Bit_score: 755
  • Evalue 2.80e-215
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 383.0
  • Bit_score: 530
  • Evalue 3.90e-148

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
ATGATGGCAATGGACGGCAAGCCCATGCTGGAAGGGATAAAGGTGGTCGATCTGACGAGCGTCGTCTTCGGCCCCTATTGCACGCATATCCTAGCCGACCTTGGCGCCGAGGTGATCAAGGTCGAGGCGCCGGGTACGGGCGACGCATTCCGCTGGTCGGGCAAGGCCGCGGCGACCCCCGGCATGAGCCCCAGCTTCATGGCGATCAACCGCGGCAAACAGTCGATCGCGCTCGACCTCAAGGCCCCCGACGATCTGGCCTGCATGAAGGCGCTGCTCGAAGAGGCCGACGTGTTCGTGCTGAACGTGCGCGGCAAGGCGGTCGAGCGGCTGGGGCTCGATTATGACGCGGTGCGGGCGATCAATCCCGGCATCATCTATGCGCATTGCGTGGGGTTCGGGCAGAACGGCCCCTATGCCGACCTGCAGGCCTATGATGACGTGATCCAGGCCGCGACGGGAACGGCAACCTTGCTGCCGCGCGTCGATGGCGATCCGCGGGCGCGCTATCTGCCGTCGCTGATCGCCGACAAGGTCGCGGGCCTCCACGCCGCCTATGCGGTGCTCGCGGCCGTGGTCCACAAACTCCGGACGGGTGAGGGACAGAAGGTGGAGATCGCGATGTTCGAAGCCTTCAGCCATTTCATGCTGCTCGAACATCTGGCCGGGCTGACCTTCGATCCCCCGAACGCGCCCGTGGGCTATTTCCGCCAGATCGATCCCGACCGGCAACCCTTCCCGACGCGCGACGGCTTCGTCAGCATCGTGCCCTATACCGACGAAGCGTGGCCGCGCGTGTTCGAGGTGCTCGGACATTCGGCGTTCTTGAAGGACGAGCGGTTCGCCACCCGCAAGGCGCGGACGGACAATCTGCCGCTGCTTTACCGAGAGATGGCCCGGTTGACCCCGGCCTTCACCACAGCCGAACTGGTTGCGAAATGCCATGCGGCGCAAATTCCGGCGCAGCCGGTGCGCGACATCGCCGATATCATGGATGACCCCCATCTGGCGGCGACGGGCTTTTTCTCGCGGCAGGAGCATCCGAGCGAAGGCGGCTATTTCGCCATGGAGCATCCCGTCCGCTTTGCAAAGCCGCTCGGATCGGCCAAGCGTCATGCCCCGCGGCTGGGTGAACAGTCCGACCGGATCCGCGCGGGGCTGAAGAAGCGATGA
PROTEIN sequence
Length: 391
MMAMDGKPMLEGIKVVDLTSVVFGPYCTHILADLGAEVIKVEAPGTGDAFRWSGKAAATPGMSPSFMAINRGKQSIALDLKAPDDLACMKALLEEADVFVLNVRGKAVERLGLDYDAVRAINPGIIYAHCVGFGQNGPYADLQAYDDVIQAATGTATLLPRVDGDPRARYLPSLIADKVAGLHAAYAVLAAVVHKLRTGEGQKVEIAMFEAFSHFMLLEHLAGLTFDPPNAPVGYFRQIDPDRQPFPTRDGFVSIVPYTDEAWPRVFEVLGHSAFLKDERFATRKARTDNLPLLYREMARLTPAFTTAELVAKCHAAQIPAQPVRDIADIMDDPHLAATGFFSRQEHPSEGGYFAMEHPVRFAKPLGSAKRHAPRLGEQSDRIRAGLKKR*