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2019_SCN_bioreactor_t3_biofilm_scaffold_163701_6

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(4484..5413)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024885E1 similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 288.0
  • Bit_score: 314
  • Evalue 7.20e-83
Fusaric acid resistance protein fusE {ECO:0000313|EMBL:GAO56486.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 309.0
  • Bit_score: 580
  • Evalue 7.50e-163
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 296.0
  • Bit_score: 315
  • Evalue 9.10e-84

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGGCCTCCCGATCCCTTGCCCCCACCTCTTTCCGGCCGATCCTGATCGGCATCCTGCGCGTCGCCATCACGCTGGCGGTGGTCGCCCTGGCGTTCGTGGCGGGACGGGCGATGTGGCAGCGCTACGAGGTCGATCCCTGGACCCGCGATGGCCGTGTGCGCGCCGATGTCGTCAAGGTCTCGTCCGACGTGCCGGGGCTGGTCACGCGCGTCCTCGTCCGGGAGAACGACCGCGTGACGAAGGGGCAGGTGCTGTTCGAGGTGGATACGCCGCGCTACCGGCTGGCGCTGGCCCAGGCGCAGGCCGCCGTGGCAAGCGCGCAGGCGACTGCCGCCGACGCCCATTCCCAGTTGCGCCGCGCACGGATGCTGGGCGATCTTGTCTCCGCCGAGGAGCGCGAGGCGCTGGAAGCCAAGGCGGAGACGGCGAGCGCCAGCCTTGAGGCGGCGCGGGTCGCGGTCAACGTGGCGCGTCTCAACCTGGAGCGCACCCTCGTCCGCGCGACGGTGAACGGCTACGTCGCCAATCTCCTGCTCAAACCGGGCGATTATCTGGCCGCCGGGGCGCAGGGGCTGGCCGTGGTCGATGCCGACACGATGTGGATCGACGGCTATTTCGAGGAAACCAAGCTGCCGCGCATCCACGTTGGCGATCGCGCAAGGGTGCTGCTGATGGGCGAAACCAGCCCGATCGAAGGGCGGGTGGAAAGCATCGCGCCGGGCATCGACGATCGCGAGCGGACCAACGCCAGCAACCAGTTGGCCAGCGTGAATCCCACGTTCAACTGGGTGCGGCTGGCGCAGCGCGTGCCGGTGCGGATTGCGCTGGTCAGGGTGCCGCAGGACATCCGCCTGATCGCCGGCAGGACCGCGACGGTCGACGTGATCGATGGCGCCGGGCGCACCGTCCATGCGGGAGGCGGGTCGTGA
PROTEIN sequence
Length: 310
MASRSLAPTSFRPILIGILRVAITLAVVALAFVAGRAMWQRYEVDPWTRDGRVRADVVKVSSDVPGLVTRVLVRENDRVTKGQVLFEVDTPRYRLALAQAQAAVASAQATAADAHSQLRRARMLGDLVSAEEREALEAKAETASASLEAARVAVNVARLNLERTLVRATVNGYVANLLLKPGDYLAAGAQGLAVVDADTMWIDGYFEETKLPRIHVGDRARVLLMGETSPIEGRVESIAPGIDDRERTNASNQLASVNPTFNWVRLAQRVPVRIALVRVPQDIRLIAGRTATVDVIDGAGRTVHAGGGS*