ggKbase home page

2019_SCN_bioreactor_t3_biofilm_scaffold_142623_13

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 10395..12077

Top 3 Functional Annotations

Value Algorithm Source
Peptidyl-dipeptidase A {ECO:0000313|EMBL:GAO56293.1}; EC=3.4.15.1 {ECO:0000313|EMBL:GAO56293.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 561.0
  • Bit_score: 1147
  • Evalue 0.0
peptidyl-dipeptidase A n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B74C53 similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 558.0
  • Bit_score: 884
  • Evalue 4.10e-254
peptidyl-dipeptidase A similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 556.0
  • Bit_score: 797
  • Evalue 1.90e-228

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1683
ATGAAATCGCTGTCTTCCGTTCTCGCGCTGGCCGTCGCGGGTCTTTCCATGACGGGCCTTGCCGCGCCCGCTTGCGCGCAGGACGCTGCCGCCACGCCCGCCACGGTGAAGACCTGGCTGTCCCAGGCGGAAAAGGACTACTTCGACCAGTCCGTCCGCACCAACCGCACCGAGTGGGTCTATCAGACCAACATTACCTACGATACCGCCGAGCTTACGTCGGCCGGCAACGCGGCGCTGACGAAGCTCCAGGTCGATCAGGCCAAGCAGGCGGCGATCCTCGCCAAGGTGCCGGGCCTTGCACCCGATGTCGCGCGCAAGCTGCTGGTCATCCGCACCCAGATCACCACGCCCGCGCCGACCACGCCCGGTGCGGCCGAGGAGTTCGCCGCGCTGCAGGCCCGCGTCCAGGGCATCTACGGCAAGGGCCATGGCACGCTGAATGGCGAGCCCGTCAATGGCAGCGACATCGAGGAAGCGATGGGCACCACGCGCGATCCGGCGAAGCTCAAGGAAATGTGGGTAAGCTGGCACGATACGGTCGGCACGCCGATGAAGGCCGACTACGTGCGCATGGTCGATATCGCCAACGCTGGCGCGCGCGAACTTGGCTTCGCCGATACGGGCGCGCTGTGGCGGTCGAACTACGATATGGACCCCGATGCCTTCGCGGCGCTGACCGAGAAGATCTGGGGCGAGGTCCAGCCGCTCTATCGCCAGCTGCACTGCTATGTCCGCACCAAGCTGAACGAGAAGTACGGCGATGCCGTGCAGCCCAGGACCGGCCCGATCCGCGCCGACCTGCTGGGCAACATGTGGGCGCAGGAATGGGGCAACATTTATGACATCGTCGCCCCCGCGGGCGCGGGCGATCTTGGTTACGACGTCACCGATCTGCTGACCGCGAAGGGCTACGATCCGCTCAAGATGGTGAAGGCGGGCGAGGGCTTCTATTCCTCGCTGGGCCTGGCGCAATTGCCCGAAACCTTCTGGCAGCGCTCGCAGTTCGTGAAGCCGCGCGATCGCGAGGTGGTGTGCCACGCTTCGGCCTGGGACGTGGACAACAAGGACGACCTGCGCATCAAGATGTGCATCAAGGTGAATGGCGACGATTTCGGCGTCATCCACCACGAACTCGGCCACAACTATTACCAGCGCGCCTACAACGGGCAGGACCCGCTTTACCTGAACGGCGCCAACGACGGCTTCCATGAAGCGATCGGCGACTTCGTGGCTCTGTCGATCACGCCCGAATATCTCGTGCAGATCGGCCTGCTCGATCGCGCGAAGGTGCCGGGCCCGGAAAAGGACACCGGCCTGCTGCTGCGTCAGGCGATGGACAAGGTGGCGTTCCTGCCTTTCGGCCTGCTGATCGATCGCTGGCGTTGGAACGTGTTCAACGGCACGATCAAGCCCGCACAGTATGAAACGGCCTGGAACGACATGCGCCTGAAGTATCAGGGCATCGTGCCGCCCGCGCCGCGCAGCCCCGATGCCTTCGATCCGGGCGCAAAGTATCACATCCCCGCCGTGGTGCCCTATACGCGCTATTTCCTGGCGCGGGTGCTGCAGTTCCAGTTCTTCGAGGCGGCGTGCAAGCAGGCCGGCTGGAAGGGGCCGCTGCACCGGTGCAGCTTCTATGGCAACAAGGCGGTGGGGCAGAAGCTCAATGCGATGCTGACG
PROTEIN sequence
Length: 561
MKSLSSVLALAVAGLSMTGLAAPACAQDAAATPATVKTWLSQAEKDYFDQSVRTNRTEWVYQTNITYDTAELTSAGNAALTKLQVDQAKQAAILAKVPGLAPDVARKLLVIRTQITTPAPTTPGAAEEFAALQARVQGIYGKGHGTLNGEPVNGSDIEEAMGTTRDPAKLKEMWVSWHDTVGTPMKADYVRMVDIANAGARELGFADTGALWRSNYDMDPDAFAALTEKIWGEVQPLYRQLHCYVRTKLNEKYGDAVQPRTGPIRADLLGNMWAQEWGNIYDIVAPAGAGDLGYDVTDLLTAKGYDPLKMVKAGEGFYSSLGLAQLPETFWQRSQFVKPRDREVVCHASAWDVDNKDDLRIKMCIKVNGDDFGVIHHELGHNYYQRAYNGQDPLYLNGANDGFHEAIGDFVALSITPEYLVQIGLLDRAKVPGPEKDTGLLLRQAMDKVAFLPFGLLIDRWRWNVFNGTIKPAQYETAWNDMRLKYQGIVPPAPRSPDAFDPGAKYHIPAVVPYTRYFLARVLQFQFFEAACKQAGWKGPLHRCSFYGNKAVGQKLNAMLT