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2019_SCN_bioreactor_t3_biofilm_scaffold_170080_4

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(3491..4555)

Top 3 Functional Annotations

Value Algorithm Source
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 354.0
  • Bit_score: 672
  • Evalue 2.90e-190
DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57) similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 354.0
  • Bit_score: 593
  • Evalue 2.60e-167
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=TSAD_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 354.0
  • Bit_score: 593
  • Evalue 9.20e-167

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
ATGGCCCTGATCCTCGGTATCGAATCTTCCTGCGATGAAACCGCCGTCGCCATCATCGATGGCAGCGCCGGTTCGCTGGAGGCGCGCATCGTCGCGCAACGCATTGCCTCGCAGGACGCCGAACACGCGCCCTATGGCGGCGTGGTGCCCGAAATCGCCGCGCGCGCACACGCCGAAGTGATCGCGCCGATGGTGGGCGCGGTGCTGGCCGACGCGGGCCTGACGCTGGAGGACATGGACGCCATTGCCGCGACCGCCGGACCGGGCCTGATCGGCGGCGTGATGGTGGGGCTGGTCACCGGCAAGGCGCTGGCCATGGCGGCGGACAAGCCGCTGATCGGGGTGAATCATCTGGAAGGGCACGCGCTGTCGCCGCGCCTGGCCGATCCCGATCTGGCCTATCCCTATTTGCTGTTGCTGGTTTCGGGCGGGCATTGCCAGATCCTGGAAGTGCGCGGACTGGGCGATTATCGCCGGCTGGCCACGACGATAGACGACGCGCTGGGCGAAGCCTTCGACAAGACCGCCAAGATCCTGGGCCTCGGCTATCCGGGCGGGCCGGCGGTGGAGCGCCTGGCGCGCGAGGGCGATCCGCGCGCGGTGCCGCTGCCGCGCCCGCTGGTGGGCAGCGGGGAGCCGCATTTCTCGTTCGCCGGCTTGAAGAGCGCGGTGATGCGCGCAAAGGATTCGGGCCTCCATGCCGATGCCGATATCGCCGCCTCGTTCCAGCAGGCCGCCATCGATTGCGTGATCGACCGGACCCGGCTGGCGCTGGAGTCGGTGGGCGAGGTCCAAGCGGAGAGTGTGACCGCGCTGGTGGTGGCGGGCGGCGTGGCCGCCAATGCGGCTTTGCGTGGCGCGCTGGAGTCGCTGGCGGCCGGATTCGGGCTACGGCTGGTGGCGCCGCCGGGCCGGCTGTGCACAGATAATGCGGCGATGATCGGCTGGGCTGGCGCGGAGCGCTTCGCTCTGGGATATACGGATCCGCTCGATCTGCCGGCGCGCCCGCGCTGGCCGCTCGATGCCAATGCCGCGCCGGTGCGCGGCGCGGGGGTGAAGGCATGA
PROTEIN sequence
Length: 355
MALILGIESSCDETAVAIIDGSAGSLEARIVAQRIASQDAEHAPYGGVVPEIAARAHAEVIAPMVGAVLADAGLTLEDMDAIAATAGPGLIGGVMVGLVTGKALAMAADKPLIGVNHLEGHALSPRLADPDLAYPYLLLLVSGGHCQILEVRGLGDYRRLATTIDDALGEAFDKTAKILGLGYPGGPAVERLAREGDPRAVPLPRPLVGSGEPHFSFAGLKSAVMRAKDSGLHADADIAASFQQAAIDCVIDRTRLALESVGEVQAESVTALVVAGGVAANAALRGALESLAAGFGLRLVAPPGRLCTDNAAMIGWAGAERFALGYTDPLDLPARPRWPLDANAAPVRGAGVKA*