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2019_SCN_bioreactor_t3_biofilm_scaffold_170411_5

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 1767..2279

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L10 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RL10_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 170.0
  • Bit_score: 290
  • Evalue 8.00e-76
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 170.0
  • Bit_score: 316
  • Evalue 1.90e-83
rplJ; 50S ribosomal protein L10 similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 170.0
  • Bit_score: 290
  • Evalue 2.30e-76

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGGATCGTTCGCAGAAAGCCGAATCGGTCGCGTTCCTGAACTCGGTCTTCTCCGAGGCCGGCGCGGTGGTCATCACCCGCAACCTCGGCATGACGGTGGCCCAGTCCACCGCCCTGCGCACGAAGATCCGGGAAGCGGGCGCGACTTACAAGGTTGCGAAGAACCGTCTTGCCAAGCTTGCCGTCGCGGGCACCGATTACGAAGGCATTGGTGATTTCTTCACCGGTCCGACGGCGATCGCTGCCTCGGCCGATCCGGTTGCCGCCGCCAAGGCTGTGATCGAATTCGCCAAGACCACCGACAAGATCGAAATTGTCGGCGGCGCGATGGGTGGCCAGATTCTCGACGCGGAAGGGGTCAAGGCGCTCGCCTCGATGCCGTCGCTCGACGAACTGCGCGCCAAGCTTATCGGCCTCGTCCAGGCTCCGGCCACGAAGATCGCCCAGCTCGCCACCGCTCCGGCGGCGAAGCTGGCCCGTGTCTTCGGCGCCTACGCCAAAGAAGCCGCGTAA
PROTEIN sequence
Length: 171
MDRSQKAESVAFLNSVFSEAGAVVITRNLGMTVAQSTALRTKIREAGATYKVAKNRLAKLAVAGTDYEGIGDFFTGPTAIAASADPVAAAKAVIEFAKTTDKIEIVGGAMGGQILDAEGVKALASMPSLDELRAKLIGLVQAPATKIAQLATAPAAKLARVFGAYAKEAA*