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2019_SCN_bioreactor_t3_biofilm_scaffold_164914_7

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(5293..5988)

Top 3 Functional Annotations

Value Algorithm Source
NADH dehydrogenase {ECO:0000313|EMBL:GAO56569.1}; EC=1.6.99.3 {ECO:0000313|EMBL:GAO56569.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 231.0
  • Bit_score: 443
  • Evalue 1.40e-121
Putative nitroreductase n=1 Tax=Gordonia terrae NBRC 100016 RepID=H5UGX7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 223.0
  • Bit_score: 354
  • Evalue 4.70e-95
nitroreductase similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 227.0
  • Bit_score: 354
  • Evalue 1.70e-95

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
GTGACGACACACAACGGGCCTGGCTACGACGCGGTCGTATTAGGCCGCCGCAGCATCCGCGGCTTTCTGAAGAAGCCGGTTCCGCGCGAACTGATCGAGGAAATCCTGGCGCTGGCGATGCGCGCGCCCTCCTCACTCAACACGCAGCCATGGAATTTCACGGTGGTGACCGGCGAACCGCTTGACCGCATCCGTGCGGAAAACACCCGCCGCAATCTGGAAGGCGTTCCCGAAAGCCGCGAGTTCCGCAAGTTCGAGGTCTATGAGGGCCCGCACCGCGAACGGCAGGTGGAAATCGCCAAGCAGCTGTTCGGCGCCATGGGCATCGCGCGCGAGGACAAGGAAAAGCGGCTGGACTGGGTGCTGCGCGGCTTCCGCCAGTTCGACGCGCCGGTCTCGATCGTCGTCACCTATGACCGGGCGCTGTTCGGAGGGGATATTGCCCCGTTCGATTGCGGCGCGGTGACGACGGCGCTGGTCAACGCGGCCTGGTCGCGCGGGCTGGGCTGCGTGATCAACAGCCAAGGCATCATGCAAAGCCCGGTGGTGCGCGAGCACGCGAAGATCGCCGACGATCAGGTCATCATGATCTGCGTGGCGATGGGCTGGCCGGACGAGAGTTTCCCCGCCAACGCCGTGATCTCGAAGCGCAAGTCGGTGGCCGACGCGGCGCGCTTCGTGGGGTTCGAGGAATAG
PROTEIN sequence
Length: 232
VTTHNGPGYDAVVLGRRSIRGFLKKPVPRELIEEILALAMRAPSSLNTQPWNFTVVTGEPLDRIRAENTRRNLEGVPESREFRKFEVYEGPHRERQVEIAKQLFGAMGIAREDKEKRLDWVLRGFRQFDAPVSIVVTYDRALFGGDIAPFDCGAVTTALVNAAWSRGLGCVINSQGIMQSPVVREHAKIADDQVIMICVAMGWPDESFPANAVISKRKSVADAARFVGFEE*