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2019_SCN_bioreactor_t3_biofilm_scaffold_202484_3

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(2446..3273)

Top 3 Functional Annotations

Value Algorithm Source
Flagellin/flagellar hook associated protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZTI2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 275.0
  • Bit_score: 400
  • Evalue 8.90e-109
Flagellin protein flaA {ECO:0000313|EMBL:GAO55408.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 275.0
  • Bit_score: 502
  • Evalue 3.00e-139
flagellin similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 277.0
  • Bit_score: 337
  • Evalue 3.40e-90

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGACCGTTATCAATACGAACATCAACGCCATACGCGCCGCGAACGCATCCAATCTCGCGACCAAGGTTCTCGGCGTTTCGATGGAGCGCCTGTCCACCGGCCTGCGCATCAACAGCGCCAAGGACGACGCGGCGGGCCTTGCCATCACCACGTCCATGACCTCGCAGATCAAGGGCATGAGCCAGGGCATCCGCAACGCCAACGATGGCATCTCGCTGGCGCAGACCGCCGAAGGCGCGCTGGGCGAAGTGACCAACATGCTCCAGCGCATCCGTGAGCTGGCGAACCAGTCGGCTTCGGGCACCTATCAGGACACCACCGACCGCGTTTACATGCAGACCGAAGTCACCGCGCTGACCGAGCAGATCGGCAGCGTCTTCAGCACGGTCAAGTTCAACGGCAACGCGCTGTTCAGCACCACGGCCGGCACCGACGTCTCGATCGACATCCAGGCGGGAGCCAACAGCGGCGATACCGTGACGCTGACCAGCACCGCCATCGACGGCACGAACCTGGCCGCCGCCGCGCTCGACGTGACCACGGCCGCCAAGGCCGTGACCACGATGAGCAACGTCGAAGCCGCGCTTTCGGATGTCAGCGCCACACGCGCCTCGCTGGGCGCGGGGCAGAACCGCCTGGAATCGGTGGTGAACAACCTCACCAGCAACGTGACTAACCTTTCGGAAGCGCGTTCGCGGATTCAGGACACCGATTACTCGGCCGAAACCACGGCGCTGGCGAAGTCGCAGATCCTCAGCCAGGCATCGACCGCGATGATCGCACAGGCCAACCAGGCCCAGCAGACCGTCCTCACGCTGCTGCGTTAA
PROTEIN sequence
Length: 276
MTVINTNINAIRAANASNLATKVLGVSMERLSTGLRINSAKDDAAGLAITTSMTSQIKGMSQGIRNANDGISLAQTAEGALGEVTNMLQRIRELANQSASGTYQDTTDRVYMQTEVTALTEQIGSVFSTVKFNGNALFSTTAGTDVSIDIQAGANSGDTVTLTSTAIDGTNLAAAALDVTTAAKAVTTMSNVEAALSDVSATRASLGAGQNRLESVVNNLTSNVTNLSEARSRIQDTDYSAETTALAKSQILSQASTAMIAQANQAQQTVLTLLR*