ggKbase home page

2019_SCN_bioreactor_t3_biofilm_scaffold_202484_10

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(9534..9713)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L32 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4C0E3 similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 58.0
  • Bit_score: 127
  • Evalue 4.10e-27
rpmF; 50S ribosomal protein L32 similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 59.0
  • Bit_score: 127
  • Evalue 1.10e-27
50S ribosomal protein L32 {ECO:0000255|HAMAP-Rule:MF_00340}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 59.0
  • Bit_score: 127
  • Evalue 5.70e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 180
ATGGCCGTCCCCAAAAGAAAGACCTCGCCGTCCCGTCGCGGCATGCGCCGCAGCCACGATGCGCTGAAGGCGGAAGCATTCCACGAATGCTCGAACTGTGGTGAACTGAAGCGTCCGCACATGCTGTGCAACGCCTGCGGTCACTACAACGGCCGCGAAGTCATCGCCGTCGGGCTCTGA
PROTEIN sequence
Length: 60
MAVPKRKTSPSRRGMRRSHDALKAEAFHECSNCGELKRPHMLCNACGHYNGREVIAVGL*