ggKbase home page

2019_SCN_bioreactor_t3_biofilm_scaffold_202484_12

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(10362..11030)

Top 3 Functional Annotations

Value Algorithm Source
Beta-lactamase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5R7_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 222.0
  • Bit_score: 412
  • Evalue 2.40e-112
Hypothetical metal-binding enzyme, ycbL homolog {ECO:0000313|EMBL:GAO55399.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 222.0
  • Bit_score: 458
  • Evalue 4.10e-126
beta-lactamase-like protein similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 222.0
  • Bit_score: 412
  • Evalue 6.70e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGACCGAAACCGCCGCGCAGCCGCCGATGAAGGTGGCCATCATCCCCGTCACGCCGCTGGAACAGAACTGCACGCTGGTGTGGTGCACCCGAACGATGAAGGCGGCGTTCATCGATGCCGGGGGCGATCCCGAGCGGTTGAAAGCGGCGATCGCCAAGGCGGGCGTCACCATCGAGAAACTGCTCGTCACCCATGGCCACATCGATCACTGCGGCGTGACCGGCATTCTGGCGAAAGACCTGGGCGTGCCGATCGAGGGGCCGCACGAGGCGGACCGCTTCTGGATTTCGCGGCTGGAGGACGACGGCAAGCGCTGGGGCATCCCCGGAGAGCCGTTCGAGCCGGATCGCTGGCTGCAGGATGGCGACAAGGTCACGATCGGCGAACTGGAGCTGGACGTGATCCATTGCCCCGGCCACACGCCTGGCCACGTCGTGTTCTATCACGCGCCGTCGCGGTTCGCGATCGTGGGAGATGTGCTGTTCCAGGGATCGATCGGGCGCACCGATTTCCCGATGGGCAACCATCAGGATCTGATCGATTCGATCACGCAGAAGCTGTGGCCGCTGGGTTCGGACGTGACGTTCGTGCCCGGTCACGGGCCGACCAGCACGTTCGGGCGCGAACGCCAGACCAATTCCTACGTCAGCGATTACGCGCTGGGGTAG
PROTEIN sequence
Length: 223
MTETAAQPPMKVAIIPVTPLEQNCTLVWCTRTMKAAFIDAGGDPERLKAAIAKAGVTIEKLLVTHGHIDHCGVTGILAKDLGVPIEGPHEADRFWISRLEDDGKRWGIPGEPFEPDRWLQDGDKVTIGELELDVIHCPGHTPGHVVFYHAPSRFAIVGDVLFQGSIGRTDFPMGNHQDLIDSITQKLWPLGSDVTFVPGHGPTSTFGRERQTNSYVSDYALG*