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2019_SCN_bioreactor_t3_biofilm_scaffold_202484_16

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(12534..16772)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Multihem cytochrome n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5R3_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 1417.0
  • Bit_score: 2611
  • Evalue 0.0
Uncharacterized protein {ECO:0000313|EMBL:GAO55395.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 1417.0
  • Bit_score: 2875
  • Evalue 0.0
multiheme cytochrome similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 1417.0
  • Bit_score: 2611
  • Evalue 0.0

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4239
ATGGAATACGTCGGCGCGATGAAGGACGCGCACGTCCTGCCGCGCTTCCCGGTGGCGTGGGGCTGGCCATCCTCGGCCAATCCCAAGCGCTCCTATGCGCTGCTGGCCAAGGAAAGCCCGGAATTCATCCGCTTCGTCAATCCGTCGGACTACCGCGTGGCGCGCGATTCCTGCGGGGCCTGCCATATGAACATCATCGAGGCGTCGGAACGCTCGCTGATGTCCACCGGCGCGATGCTGTGGGGCGGCGCGGCCTATAACAACGGCATCGTCCCCTTCAAGAACTACATGTTCGGGGAAAGCTTCACCCGCCAGGGCGAACCCGCGCTGCTCAAGTCCGCGTCGAAGGAAATCGGCCCGGACGGCAAGCCGATGTGGGGCACCGTCACCCCGCAGGAAAAGGCGCGCGGCGCGCTGCCCGTGCTCTATCCGCTGCCGCGCTGGCACACGATTCCGCCGGCCGACGTGTTCCGCGTGTTCGAGGACGGCGGCCGCACGATCAACCCGCAGTTCCCCGAAATCGGCCTGCCCAACTCGACTGGCCTGATCCAGCGGCTGGACGAACCGGGCCGGCCCGATCTCAAGCAGTCGAACCGCGGCCCCGCCACGGGCCTGCGCGTGGCGATTCCGGTGCTGAACATCCACAAGACGCGCCTGAACGACCCGTTCCTGTTCCAGATGGGCACCAACGACCAGCCGGGCGACTACCGCTCCTCGGGCTGCGCCTCCTGCCACGTTATCTACGCCAACGATCGCGAGCCGCGCCACAGCCTGAACTATGGCAAGTGCGGGCGCGACGGGCAGACGATCACCGCCGATCCCACGATCAATTCATTGCGCGAAGGCCAGCATCGCGCCGGCAAGTACGGCAGCTATGACGCGGCGAAGGAAGAGCACAAGACGCGCGTGCGCGGCACCGTGCTGGGCGGGCAGGGCGGCTATCTGCAAGGCGACGCCAGCGATCCCGCCGGCTCGAAGGACCTGGCCGGAGACTGCGCACGCGCCATTGCTTCGGCGGAACAACTCGCGTTCTCGCCCGCTTCCGGCGTCGCACCGCACGGGTCGATGGACGCGCATGCCATGGGCCAGGCCGAAGCGCACGCGATGGCGGGACTGGACAAGTCCGGCCATGCCGTGCCTGCTCCCGCCGGCGGCCATGACGATGGCCCGGTGGCGATGCAGGACCGCGAACGCGGCCACCCGCTGGTCCATGCCTGTACCCGCGCCATCCCCACGGCGCAGTGCATGAACTGCCACATGCACCAGCCCAACATCTTCCTGAACACCTACCTTGGCTACATCATGTGGGACTACGAATCCGATGCGGATTCGATGTGGCCGGGGCCGGAGAACCGCGCGCCGAAGCCGGCGGGCATGTCCGACGCCGACTACGAGCGTATCTATAAGAAGCAGTTCCACCCGAACATGGCCGAAGCGCGCGAGATTCTGGACCGCAATCCGGAAGCCGCCTCCACCCACGGCCTGTGGCGCGACGTGGAGTTTCTGCGCAACGTCTATGACCTGAACCCGCAGCTCAAGAACACCCAGTTCGCGGACTACCACGGCCACGGCTGGAACTTCCGCGCGATCCTCAAGCGCGACCGGCGCGGGAACCTGCTGGACGACGAAGGCGACATGTCGAGCTACGGCACCGACAAGGCGCACATCGTCAATCCGGACGATCCGGAGAAGTGGCGCAAGAACGGTGAGGGCAAGTTCGTGGAACCGGGGCCGGACAATCCCGGCAAGGCGGTCCACATGATGGACATCCATGCTCAGCTCGGCATGCAGTGCGCCGATTGCCACTTCTCGCAGGACAGCCACGGCAACGGCATGATCATGGGCGAAGTCGCCAACGCGGTGGAGATCGGCTGCAAGGACTGCCACGGCACGCCCGACGCCTATCCCACGCTGATGACGTCGAACCTCGCCGCGCCGCCCAAGGGCAACAACCTCAGCCTGTTGCGCAACGCCGATGGCCAGCGCCGCTTCGAATGGATGAAGGCGGCCGACGGGCGCCGCGTGCTGGTCCAGCGCTCGATCATCGATCCCAACCTCTCCTGGCGCGTCAGCCTGGTGAAGGATTCGGTCGATGCCCGCTTCGCCGGCAAGGTTGACGACCTGGGCAAGCCGATCTTCAATCCCAAGGCGGCGCGCGCCAAGCTGATGGCGAAATCCGCCGCGCAGGATGGCGTTTACAAGTTCGGCACCGGCGTGCCCAAGGAACAGCGCGCCCACCGCGATGACGACATGGCGTGCTTCACCTGCCACCTCTCGTGGACCACGTCGTGCGCCGGCTGCCACCTGCCGATCGAGGCGAACTGGAAGTCCACCACGCACAAGTACGAGGAAGACTACACCCGCAACTACGCGACCTATAACCCGCAGGTCGCGCGCGATGACATGTTCCAGCTCGGCAAGCACCAGCGCAACAAGACCTCGGGCTCCGATCCGGTGCAGTTCGACAAGGACGGCAACCCCGTCAGCGGCAAGGCGATCACCGCGCCGATCCGCTCGTCCTCGGCGCTGATCCTGTCGTCCACCAACATCAACCGCGAACGGATCTACGTGCAGCAGCCGCCGATCTCGGCGATCGGCTATTCCTCGCAGGCGTTCGCGCCGCACTTCCCGCACACCGTCCGCAAGAACGAGACCAAGCAGTGCACCGACTGCCACCTCAGCCAGCAGGACGATAACAACGCGATCATGGCGCAGCTGCTGCTGCTCGGCACCAATTACGTGAACTTCGTCGGCATGAACGCCTGGTTCGGGCTGGACGGCGGGTTCGAGGCGGTGCGCGTCACCGAATGGGACGAGCCGCAGGCGGTGATCGGCAGCTATCTGCACCGCTATGCCTATCCGGACTACTGGAAGCAGCACGTCGAGAAGAACGGCCGCGAGCTGAAGGACTGGACGCGCGGCGGCGTGATCGACGGCAAGCTCTCGGAAGAGACCAAGGGACGCGAACAGTTCACCAACGTCACCAAGGGCACATCGGACGCGGTCCGCTGCCTGCAGATGCGCGGCGAATACATGTTCGTGGCCGAAGGGAAGGGCGGCTTCCGCGCCTATGACATCGCCTCGGTCGGCAACAAGGGCTTCTCGGAGCGGATCACCACCGCGCCGTTCTCGCCACTCGGGCATGACACGCACGTGGACACGAAGAACGCCACGTGCATGGCGCTGCCCACCAACCAGGCGATCGCGCCCACGCGCAACACGCCCGAACTGCGCCATCTCAACCAGGAGCAGCCGTTCTCGCCGATCTACCACTACGCCTTCGTCACCGATGCCGTGGAAGGACTGATCGCGGTCAATGTCGATACGCTGGCCGACGGTGAATTCCGCAACAACTTCTTCCGCCGCGCGCTGACGTTCAATCCGGACGGCGTGCTGACGGGGGCGCGGCACATCACGCTGGCAGGCGACTATGCCTATATCGTCACCGACAAGGCGCTGGTCACGGTCCACCTGCCCAAGCCGTGGTCGCCGGGCAAGCCGTGCGAGGCGAGCGAGGAGAAGGGCGGCGAGACCTGCCTCGATCCGCGCGTCACCTCGGTCGTGCCGCTGAAGGACCCGCGCGCCACGGCGGTGCAGTTCCGCTACCTGTGGGTGACGACGGCCAACGGCCTGGAACTGATGGACGTGACCAATCTGGCGCAGCCCGTGCCGGTGCCGCAGGCCACCGTTCCGCTGGCTGATGCCCGCCGCGTCTATGTCGCGCGCACCTATGCCTATGTAGCGGCCAAGGCGCAGGGGCTGGTGATCGTGGACGTGACCGCGCCCACGCGCCCGGCGATCCAGCAATCGTTCACCGCCGATGGGCAGTTGAACGATGCCGAGGACGTGATCGTCGCCTCCACCAACGCCTCGCTGTTCGCCTATGTCGCGGACGGGCGGAACGGGATGAAGGTGGTGCAGCTCACTTCGCCGGCCAGCCAGCCGAACTTCTACGGCTTCTCGCCCGAACCACGGCCGGAACTGATCGCCTGGGCGCATACGCCAAGCCCCGCGCTGGCACTGTCGAAGGGGCTGGATCGCGATCGCGGCGTGGACGAAACGGGCGGGCAGATCGCCATCTTCGGCCGCCTGGGATCGCGTCCGTTCAACCGCGCGGAGATGGAGGAACTGTTCCTCAACGATCGCAGGGAACCGTTCCGGGTCTCGAACGCTGTGGACATGAATCTCTGGGTCGGTGCCACCACCGCGCCGCAGTTGATGGCGAAGATCGACCGTTAG
PROTEIN sequence
Length: 1413
MEYVGAMKDAHVLPRFPVAWGWPSSANPKRSYALLAKESPEFIRFVNPSDYRVARDSCGACHMNIIEASERSLMSTGAMLWGGAAYNNGIVPFKNYMFGESFTRQGEPALLKSASKEIGPDGKPMWGTVTPQEKARGALPVLYPLPRWHTIPPADVFRVFEDGGRTINPQFPEIGLPNSTGLIQRLDEPGRPDLKQSNRGPATGLRVAIPVLNIHKTRLNDPFLFQMGTNDQPGDYRSSGCASCHVIYANDREPRHSLNYGKCGRDGQTITADPTINSLREGQHRAGKYGSYDAAKEEHKTRVRGTVLGGQGGYLQGDASDPAGSKDLAGDCARAIASAEQLAFSPASGVAPHGSMDAHAMGQAEAHAMAGLDKSGHAVPAPAGGHDDGPVAMQDRERGHPLVHACTRAIPTAQCMNCHMHQPNIFLNTYLGYIMWDYESDADSMWPGPENRAPKPAGMSDADYERIYKKQFHPNMAEAREILDRNPEAASTHGLWRDVEFLRNVYDLNPQLKNTQFADYHGHGWNFRAILKRDRRGNLLDDEGDMSSYGTDKAHIVNPDDPEKWRKNGEGKFVEPGPDNPGKAVHMMDIHAQLGMQCADCHFSQDSHGNGMIMGEVANAVEIGCKDCHGTPDAYPTLMTSNLAAPPKGNNLSLLRNADGQRRFEWMKAADGRRVLVQRSIIDPNLSWRVSLVKDSVDARFAGKVDDLGKPIFNPKAARAKLMAKSAAQDGVYKFGTGVPKEQRAHRDDDMACFTCHLSWTTSCAGCHLPIEANWKSTTHKYEEDYTRNYATYNPQVARDDMFQLGKHQRNKTSGSDPVQFDKDGNPVSGKAITAPIRSSSALILSSTNINRERIYVQQPPISAIGYSSQAFAPHFPHTVRKNETKQCTDCHLSQQDDNNAIMAQLLLLGTNYVNFVGMNAWFGLDGGFEAVRVTEWDEPQAVIGSYLHRYAYPDYWKQHVEKNGRELKDWTRGGVIDGKLSEETKGREQFTNVTKGTSDAVRCLQMRGEYMFVAEGKGGFRAYDIASVGNKGFSERITTAPFSPLGHDTHVDTKNATCMALPTNQAIAPTRNTPELRHLNQEQPFSPIYHYAFVTDAVEGLIAVNVDTLADGEFRNNFFRRALTFNPDGVLTGARHITLAGDYAYIVTDKALVTVHLPKPWSPGKPCEASEEKGGETCLDPRVTSVVPLKDPRATAVQFRYLWVTTANGLELMDVTNLAQPVPVPQATVPLADARRVYVARTYAYVAAKAQGLVIVDVTAPTRPAIQQSFTADGQLNDAEDVIVASTNASLFAYVADGRNGMKVVQLTSPASQPNFYGFSPEPRPELIAWAHTPSPALALSKGLDRDRGVDETGGQIAIFGRLGSRPFNRAEMEELFLNDRREPFRVSNAVDMNLWVGATTAPQLMAKIDR*