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2019_SCN_bioreactor_t3_biofilm_scaffold_203093_1

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(1..471)

Top 3 Functional Annotations

Value Algorithm Source
polysaccharide biosynthesis protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B47AE3 similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 163.0
  • Bit_score: 245
  • Evalue 3.60e-62
Uncharacterized protein {ECO:0000313|EMBL:GAO53834.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 162.0
  • Bit_score: 303
  • Evalue 1.50e-79
polysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 157.0
  • Bit_score: 235
  • Evalue 1.00e-59

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGAGCAAGGCCGCCGACACTCCCCCGCAAATGCCCCCGCCTCAGATGTCCGTGCGCACCGCCGCCGCCTGGGCGCTGGTATCGCAATACACCTCCTTCGCGATCCAGTTCATGACCAGCGTGGTCCTGGCGCGCTGGTTCATCACGCCGGCGGAACTCGGGCTGTTCTCGATCGCCTTCGCGGCGGTCACGATCGTCGCCTTCCTGCAGGATTTCGGCGTGACCCGCTACGTCAACGGCGAGCGCGACCTGACGCCCGAAAAGCTGCACATGGCGTTCACCGTCTCGGTGGCCTTCGCCTGGGGCATCGCGATCCTGACGATCCTTTCGGCCAAGCCGATCGCCCTGTTCTACGGCGATCCGCGCCTGCTGCCGATCACGCTGGTCATCGCCTGTTCCTATCTGGCGGTTCCGCTCGCCATCGTGCCGCAGGCGACCTGCCAGCGGCGCATGGACTACAAGTCCAACACG
PROTEIN sequence
Length: 157
MSKAADTPPQMPPPQMSVRTAAAWALVSQYTSFAIQFMTSVVLARWFITPAELGLFSIAFAAVTIVAFLQDFGVTRYVNGERDLTPEKLHMAFTVSVAFAWGIAILTILSAKPIALFYGDPRLLPITLVIACSYLAVPLAIVPQATCQRRMDYKSNT