ggKbase home page

2019_SCN_bioreactor_t3_biofilm_scaffold_217070_6

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 5707..6309

Top 3 Functional Annotations

Value Algorithm Source
General secretion pathway L n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4Y8_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 183.0
  • Bit_score: 164
  • Evalue 7.80e-38
General secretion pathway protein L {ECO:0000313|EMBL:GAO53857.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 201.0
  • Bit_score: 323
  • Evalue 1.10e-85
general secretion pathway L similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 183.0
  • Bit_score: 164
  • Evalue 2.20e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGGATGCGGCAAGCGCCTTTACAGCGCCTGATGGGCTGCCCGGTGGTCTGCCGGATGGCCTGATCCTGCTGCTGCCGGCCCGGGCCGACGGCGGCTGGCGCTGGTGGCGCGTGGAACAGGGGCGCCTTGGCCGCGAGCGGTCGTTCATGCCCGATGCCGAAGCCGCGCCGTGGGGCAGGCTGGAGGAAGGCGGCGTGGTCACGGCGCTGGTGCCGGCCGCGCTGGCACCGGTGCGCGACCGGCCCGTGCCCGACATGCCGCCGGCCCAGGCGATCGCCGCTGCCCGGTTGGAGGCCGAAGCGCAAGGGATCGGCTCCGCGCACCGCCATGCCGCCGCTGCCGCAGGGGAAGGTCGCCTGCTTTCCGTCACGGTGGACGCGGGCGACATGGACCGCTGGCTGGCGGAGCTGGCGGAAGCGGGGCTCGATGCGACGGCGCTGGTGCCCGCCGCACTGGTGCTCCCGCGCCCCGCTGCGGGCATGGTGACGGCGGAACTGGGTGGCGAGCCGCTGGCGCGCACGCCTGATGCGGCGTTCGTGGGCGAACCCGCGTTGACCGGACTTCTCGCGGATGCCGGAGGAACCGTGGCGCTCGATGCCGAA
PROTEIN sequence
Length: 201
MDAASAFTAPDGLPGGLPDGLILLLPARADGGWRWWRVEQGRLGRERSFMPDAEAAPWGRLEEGGVVTALVPAALAPVRDRPVPDMPPAQAIAAARLEAEAQGIGSAHRHAAAAAGEGRLLSVTVDAGDMDRWLAELAEAGLDATALVPAALVLPRPAAGMVTAELGGEPLARTPDAAFVGEPALTGLLADAGGTVALDAE