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2019_SCN_bioreactor_t3_biofilm_scaffold_222688_5

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 4007..5263

Top 3 Functional Annotations

Value Algorithm Source
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 423.0
  • Bit_score: 829
  • Evalue 1.60e-237
isoamylase (EC:3.2.1.68) similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 414.0
  • Bit_score: 644
  • Evalue 1.50e-182
glycogen-debranching protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B48524 similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 402.0
  • Bit_score: 646
  • Evalue 1.80e-182

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGCCGATCGTGGCGTGGATCGACGAGCGGCACCTGCCGCCGCTGGGGCTGTGCAATGCCTGGGGCTACAACCCGGTGGCGCCGATGGCGCTCGATCCGGGCCTGTGCCCCGGCGGCGTGGCCGAACTGCGCGATACCGTGGCCGCGCTGCATGCCGAAGGGATCGGCGTGCTGCTCGATCTGGTGTTCAACCACACTGGCGAAAGCGATGTGTTCGGCCCCATCCTCTCGCTGCGCGGGCTGGACAACGCCGCCTATGCCCACGCGCCCGACGGCAGCCTGATCAACGACACCGGCTGCGGCAACACGCTCGATTTCGGCAAGTCGGCGGTACGCCGGCTGACGCTCGACACGCTGCGCCATTTCGTGCGGCACGCCGGCGTGGACGGTTTCCGCTTCGATCTTGCCCCGATCATGGCGCGCAGCCCCGGCTTTGCCGCCGATGCGCCGATCTTCGCCGAGATTGCCGCCGATCCTCTGCTGGCCGACCGCGTGATGATCGCCGAACCGTGGGACATCGGCCCCGGCGGATACCAGCTGGGCCGGTTTCCCGACACCTGGCTGGAATGGAACGACCGCTATCGCGATGATGTGCGGCGCTTCTGGCGCGGCGACGAAGGCGTGGGCGTGCTGGCGACGCGCGTGGCCGGGTCGTCCGACGTGTTCGGCAAGCAAAGCTGCCGCAGCGTGAACTTCCTCGCCGCGCACGACGGGTTCACGCTGGCCGACAGCGTAGCCTACGAGCACCGCCACAACCGGGCCAATGGCGAGGACAACCGCGACGGCCATGGCGAGAACTTCTCGTGGAACAACGGCGTGGAAGGCCAGACCGGCGATCCTGTCGTGCTCGCCCGCCGCGCCGCGGACCTACGCGCGTTGCTGGGCACGCTGTTCGGCTCGACTGGTACGATCATGCTGACCGCCGGCGACGAGTTCGGCCGCACGCAGCAGGGCAACAACAACGCCTATGCGCAGGACAACGCGATCGGCTGGGTCGACTGGGCCGGCCGCGACCGCGCGCTGGAAGACTGGGTGGCCGCCCTCGCCGCATGGCGCGGCGCGCGGGCGGACTGGTTCACGCGCTTTCCCGAGGAGGGGCAGTGGTCATCGCTCGATGGCCGCCCGATGGATGCGGCGCTGTGGGAAGCCCCCGAAACGGAAGGCTTCCACTACGCGTCGCACGATCCGGCCCGCCCCTTCGCGCTGACGATCGACCGGGCCGCCCGGCTCGCGCGGCCCGCCGATAATCAGGGATGA
PROTEIN sequence
Length: 419
MPIVAWIDERHLPPLGLCNAWGYNPVAPMALDPGLCPGGVAELRDTVAALHAEGIGVLLDLVFNHTGESDVFGPILSLRGLDNAAYAHAPDGSLINDTGCGNTLDFGKSAVRRLTLDTLRHFVRHAGVDGFRFDLAPIMARSPGFAADAPIFAEIAADPLLADRVMIAEPWDIGPGGYQLGRFPDTWLEWNDRYRDDVRRFWRGDEGVGVLATRVAGSSDVFGKQSCRSVNFLAAHDGFTLADSVAYEHRHNRANGEDNRDGHGENFSWNNGVEGQTGDPVVLARRAADLRALLGTLFGSTGTIMLTAGDEFGRTQQGNNNAYAQDNAIGWVDWAGRDRALEDWVAALAAWRGARADWFTRFPEEGQWSSLDGRPMDAALWEAPETEGFHYASHDPARPFALTIDRAARLARPADNQG*